Factsheet for Bra014649.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009364.1-P
Bra023876.1-P
Bra025394.1-P
Bra026012.1-P
Bra036215.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G57040.1	Bra026012.1-P	AT1G16970.1	18642946
AT3G57040.1	Bra023876.1-P	AT3G21510.1	10930573
AT3G57040.1	Bra023876.1-P	AT3G21510.1	16965536
AT3G57040.1	Bra025394.1-P	AT3G29350.1	10930573
AT3G57040.1	Bra036215.1-P	AT3G29350.1	10930573
AT3G57040.1	Bra025394.1-P	AT3G29350.1	16965536
AT3G57040.1	Bra036215.1-P	AT3G29350.1	16965536
AT3G57040.1	Bra025394.1-P	AT3G29350.1	18642946
AT3G57040.1	Bra036215.1-P	AT3G29350.1	18642946
AT3G57040.1	Bra025394.1-P	AT3G29350.1	21798944
AT3G57040.1	Bra036215.1-P	AT3G29350.1	21798944
AT3G57040.1	Bra009364.1-P	AT5G08720.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76036	Canola	nucleus	94.87	98.67
Bra003265.1-P	Field mustard	cytosol	84.19	82.08
Bra007295.1-P	Field mustard	cytosol	81.62	80.93
AT3G57040.1	Thale cress	nucleus	76.92	76.92
Bra000224.1-P	Field mustard	nucleus	67.95	73.61
Bra004615.1-P	Field mustard	nucleus	64.1	70.09
Bra016943.1-P	Field mustard	cytosol	65.81	69.37
VIT_08s0007g05390.t01	Wine grape	nucleus	57.69	61.93
PGSC0003DMT400076758	Potato	nucleus	59.4	61.5
Solyc10g079600.1.1	Tomato	nucleus	59.4	61.23
PGSC0003DMT400076726	Potato	nucleus	58.55	60.62
PGSC0003DMT400007618	Potato	nucleus	54.27	59.35
GSMUA_Achr11P...	Banana	nucleus	46.15	58.38
Solyc10g079700.1.1	Tomato	nucleus	58.97	57.74
GSMUA_Achr3P08680_001	Banana	cytosol	46.58	57.67
KRH66808	Soybean	nucleus	60.68	57.26
GSMUA_AchrUn_...	Banana	nucleus	48.72	57.0
KRG95133	Soybean	nucleus	59.83	56.91
GSMUA_Achr5P08230_001	Banana	nucleus	46.58	56.48
GSMUA_Achr11P...	Banana	nucleus	43.16	55.8
TraesCS4B01G178900.1	Wheat	cytosol	33.33	55.32
Os12t0139400-01	Rice	nucleus	47.01	54.73
Os11t0143300-02	Rice	cytosol	47.01	52.88
Zm00001d011849_P002	Maize	cytosol	51.71	51.93
KXG27703	Sorghum	nucleus	44.44	51.49
Os01t0952500-01	Rice	cytosol	50.43	50.86
Bra014695.1-P	Field mustard	cytosol	27.35	50.39
TraesCS5B01G132900.2	Wheat	cytosol	49.57	50.0
TraesCS5D01G140200.1	Wheat	nucleus	48.72	49.35
Bra000199.1-P	Field mustard	cytosol	32.91	47.83
EES02064	Sorghum	cytosol	50.0	47.76
TraesCS5A01G131600.2	Wheat	nucleus	47.86	47.06
Bra018084.1-P	Field mustard	cytosol, nucleus, plastid	35.47	46.37
Bra033773.1-P	Field mustard	nucleus	35.47	46.11
HORVU5Hr1G043090.1	Barley	nucleus	47.01	45.08
TraesCS3B01G548600.1	Wheat	cytosol	46.15	45.0
Zm00001d023242_P001	Maize	nucleus	26.5	44.6
Bra015885.1-P	Field mustard	cytosol, golgi, peroxisome	34.19	43.24
Bra007242.1-P	Field mustard	cytosol, nucleus, plastid	31.2	43.2
HORVU3Hr1G108540.2	Barley	nucleus	45.73	43.15
Bra010132.1-P	Field mustard	nucleus	34.62	42.63
Zm00001d052476_P001	Maize	nucleus	21.79	41.8
Bra016526.1-P	Field mustard	cytosol	36.75	41.55
Bra025708.1-P	Field mustard	nucleus	36.75	40.38
TraesCS3D01G494600.1	Wheat	nucleus	45.73	39.78
Bra003782.1-P	Field mustard	cytosol	32.91	39.09
Bra027829.1-P	Field mustard	nucleus	37.18	38.5
KXG22820	Sorghum	endoplasmic reticulum	44.44	37.28
GSMUA_Achr8P09640_001	Banana	cytosol	26.92	35.8
Bra018439.1-P	Field mustard	nucleus	38.03	35.46
Bra019932.1-P	Field mustard	nucleus	38.03	35.18
Bra031714.1-P	Field mustard	nucleus	38.46	34.48
Bra036963.1-P	Field mustard	nucleus	38.46	34.48
Bra019524.1-P	Field mustard	cytosol	19.66	34.33

Protein Annotations

MapMan:11.4.2.5	Gene3D:3.40.50.2300	EnsemblPlantsGene:Bra014649	EnsemblPlants:Bra014649.1	EnsemblPlants:Bra014649.1-P	InterPro:CheY-like_superfamily
GO:GO:0000160	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	InterPro:IPR001789	UniProt:M4DDT0	PFAM:PF00072	PFscan:PS50110
PANTHER:PTHR43874	PANTHER:PTHR43874:SF26	SMART:SM00448	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI000254459D
SEG:seg	:	:	:	:	:

Description

AT3G57040 (E=9e-090) ARR9, ATRR4 | ARR9 (RESPONSE REGULATOR 9); transcription regulator/ two-component response regulator

Coordinates

chrA04:-:2004110..2005202

Molecular Weight (calculated)

25934.1 Da

IEP (calculated)

4.935

GRAVY (calculated)

-0.363

Length

234 amino acids

Sequence
(BLAST)

001: MGMAAVESQF HVLAVDDSSF DRKLIEKLLQ KSSCQVTTVD SGYKALEFLG IESNDPNALS TSPQEVEVNL IITDYCMPGM TGYDLLKKVK ESSAFKNIPV
101: VIMSSENVPA RISRCLEEGA EEFFLKPVRM ADLNKLKPHM MKTKLNNQKL EEIEKPLNVS AAAAAAVEPE IKDSAEVGSK ILTLQSELEP KQVHLQVAQQ
201: EEQTLGNNNK RKSMEEGLST DRSRPRFECV TTAV

Best Arabidopsis Sequence Match ( AT3G57040.1 )
(BLAST)

001: MGMAAESQFH VLAVDDSLFD RKLIERLLQK SSCQVTTVDS GSKALEFLGL RQSTDSNDPN AFSKAPVNHQ VVEVNLIITD YCMPGMTGYD LLKKVKESSA
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV

Arabidopsis Description

ARR9Two-component response regulator ARR9 [Source:UniProtKB/Swiss-Prot;Acc:O80366]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.