Factsheet for Bra009364.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003265.1-P
Bra003782.1-P
Bra007295.1-P
Bra014649.1-P
Bra015885.1-P
Bra016526.1-P
Bra018084.1-P
Bra019524.1-P
Bra025708.1-P
Bra033773.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G08720.1	Bra016526.1-P	AT1G19050.1	18642946
AT5G08720.1	Bra025708.1-P	AT1G19050.1	18642946
AT5G08720.1	Bra003782.1-P	AT1G74890.1	18642946
AT5G08720.1	Bra015885.1-P	AT1G74890.1	18642946
AT5G08720.1	Bra018084.1-P	AT3G48100.1	18642946
AT5G08720.1	Bra019524.1-P	AT3G48100.1	18642946
AT5G08720.1	Bra033773.1-P	AT3G48100.1	18642946
AT5G08720.1	Bra003265.1-P	AT3G57040.1	18642946
AT5G08720.1	Bra007295.1-P	AT3G57040.1	18642946
AT5G08720.1	Bra014649.1-P	AT3G57040.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21561	Canola	plastid	95.86	96.26
CDX69927	Canola	plastid	96.69	96.15
AT5G08720.1	Thale cress	plastid	81.35	81.92
PGSC0003DMT400037740	Potato	cytosol	59.25	66.51
Solyc05g009080.2.1	Tomato	nucleus	59.53	61.57
PGSC0003DMT400031503	Potato	cytosol	31.63	61.23
VIT_07s0031g02780.t01	Wine grape	plastid	62.02	61.09
KRH53975	Soybean	plastid	60.64	60.64
KRH59638	Soybean	plastid	60.08	60.0
KRH40988	Soybean	nucleus	59.25	59.5
KRH63959	Soybean	plastid	58.29	59.02
GSMUA_Achr6P18920_001	Banana	mitochondrion	58.01	58.25
EER93131	Sorghum	plastid	55.52	56.07
Os03t0837900-01	Rice	plastid	55.8	55.96
HORVU5Hr1G118480.8	Barley	mitochondrion	48.76	55.94
TraesCS5B01G520700.1	Wheat	plastid	55.52	55.52
TraesCS4A01G353400.1	Wheat	plastid	55.11	55.19
Zm00001d034779_P001	Maize	plastid	55.66	54.39
TraesCS5D01G519900.1	Wheat	plastid	55.25	52.98
Bra036320.1-P	Field mustard	plastid	8.56	21.53
Bra000919.1-P	Field mustard	plastid	8.43	21.4

Protein Annotations

Gene3D:3.30.530.20	MapMan:35.2	EnsemblPlantsGene:Bra009364	EnsemblPlants:Bra009364.1	EnsemblPlants:Bra009364.1-P	InterPro:COQ10_START
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003723	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009791
GO:GO:0009987	GO:GO:0010239	GO:GO:0010468	GO:GO:0031426	GO:GO:0042644	GO:GO:0048027
GO:GO:0048507	InterPro:IPR023393	UniProt:M4CYR7	PFAM:PF03364	PANTHER:PTHR34060	PANTHER:PTHR34060:SF2
SUPFAM:SSF55961	InterPro:START-like_dom_sf	UniParc:UPI0002543B79	SEG:seg	:	:

Description

AT5G08720 (E=0.0) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01650.2); Has 578 Blast hits to 324 proteins in 67 species: Archae - 1; Bacteria - 248; Metazoa - 1; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 269 (source: NCBI BLink).

Coordinates

chrA10:-:16352000..16355771

Molecular Weight (calculated)

82481.2 Da

IEP (calculated)

7.550

GRAVY (calculated)

-0.519

Length

724 amino acids

Sequence
(BLAST)

001: MSVSKLPLLS HGVHSTDSFN FAKEPAALSV LLPCPSQIRL FSPFFTTAIG GSGVVKCRGT RHSRGGEEGL RKESFVEEDD DDERGERKVR CEVDVISWRE
101: RRIRGEIWVD SDSQSVWDVL TDYERLADFI PNLVSSGRIP CPHPGRIWLE QRGLQRALYW HIEARVVLDL HECPDSPNGR ELHFSMVDGD FKKFEGKWSV
201: KSGIRSVGAV LSYEVNVIPR FNFPAIFLER IIRSDLPVNL RAVARQAEIN YRAREKPSII DALLGRASVP STPSHSVESE SPVTERSAAT SSAGSLSHSN
301: ELNNNWGVYG KVCKLDKPCT VDEVHLRRFD GLLENGGVHR CAIASITVKA PVCEVWKVLT AYESLPEIVP NLAISKILSR ENNKVRILQE GCKGLLYMVL
401: HAKAVLDLHE TREQEIRFEQ VEGDFDSLEG KWIFEQLGNH HTLLKYTVES KMRKDTFLSE AIMEEVIYED LPSNLCAIRD YIEKRGDKSS ETCKVETCHV
501: SEETCYSSRD TSTETVKNSN DCADQTKQRA RIPGLQRDIE VLKSEILKFI SEHGQEGFMP MRKQLRSHGR VDIEKAITRM GGFRRIAVMM NLSLAYKYRK
601: PKGYWDNLEN LQEEIGKFQQ SWGMDPSFMP SRKTFERAGR YDIARALEKW GGLHEVSRLL ALNVRHPSRQ LNSRKDNGGT MQRSESIDTD LNSTLSSKKN
701: KPYVSQDTEK WLYKLKDLDI NWVQ

Best Arabidopsis Sequence Match ( AT5G08720.1 )
(BLAST)

001: MSVSKFPHLS HGVHTINFLN EPVFLSVLLP SPSRIRVFSS ISTSGIGGGV AKCHGTRHSG AGGRGDNGLR RDSGLGFDER GERKVRCEVD VISWRERRIR
101: GEIWVDSDSQ SVWNVLTDYE RLADFIPNLV WSGRIPCPHP GRIWLEQRGL QRALYWHIEA RVVLDLHECL DSPNGRELHF SMVDGDFKKF EGKWSVKSGI
201: RSVGTVLSYE VNVIPRFNFP AIFLERIIRS DLPVNLRAVA RQAEKIYKDC GKPSIIEDLL GIISSQPAPS NGIEFDSLAT ERSVASSVGS LAHSNELNNN
301: WGVYGKACKL DKPCTVDEVH LRRFDGLLEN GGVHRCAVAS ITVKAPVCEV WKVLTSYESL PEIVPNLAIS KILSRDNNKV RILQEGCKGL LYMVLHARAV
401: LDLHEIREQE IRFEQVEGDF DSLEGKWIFE QLGSHHTLLK YTVESKMRKD SFLSEAIMEE VIYEDLPSNL CAIRDYIEKR GEKSSESCKL ETCQVSEETC
501: SSSRAKSVET VYNNDDGSDQ TKQRRRIPGL QRDIEVLKSE ILKFISEHGQ EGFMPMRKQL RLHGRVDIEK AITRMGGFRR IALMMNLSLA YKHRKPKGYW
601: DNLENLQEEI GRFQQSWGMD PSFMPSRKSF ERAGRYDIAR ALEKWGGLHE VSRLLALNVR HPNRQLNSRK DNGNTILRTE STEADLNSTV NKNNKPYVSQ
701: DTEKWLYNLK DLDINWVQY

Arabidopsis Description

At5g08720 [Source:UniProtKB/TrEMBL;Acc:Q9C5A5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.