Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH40988 | Soybean | nucleus | 92.41 | 92.93 |
| KRH53975 | Soybean | plastid | 69.93 | 70.03 |
| KRH63959 | Soybean | plastid | 67.86 | 68.81 |
| PGSC0003DMT400037740 | Potato | cytosol | 60.55 | 68.06 |
| Solyc05g009080.2.1 | Tomato | nucleus | 61.38 | 63.57 |
| VIT_07s0031g02780.t01 | Wine grape | plastid | 64.0 | 63.13 |
| PGSC0003DMT400031503 | Potato | cytosol | 32.28 | 62.57 |
| AT5G08720.1 | Thale cress | plastid | 60.69 | 61.2 |
| Bra009364.1-P | Field mustard | plastid | 60.0 | 60.08 |
| GSMUA_Achr6P18920_001 | Banana | mitochondrion | 59.72 | 60.06 |
| CDY21561 | Canola | plastid | 59.72 | 60.06 |
| CDX69927 | Canola | plastid | 59.59 | 59.34 |
| Os03t0837900-01 | Rice | plastid | 56.69 | 56.93 |
| HORVU5Hr1G118480.8 | Barley | mitochondrion | 49.38 | 56.74 |
| EER93131 | Sorghum | plastid | 55.59 | 56.21 |
| TraesCS5B01G520700.1 | Wheat | plastid | 55.17 | 55.25 |
| TraesCS4A01G353400.1 | Wheat | plastid | 55.03 | 55.19 |
| Zm00001d034779_P001 | Maize | plastid | 55.72 | 54.52 |
| TraesCS5D01G519900.1 | Wheat | plastid | 55.45 | 53.24 |
| KRH33686 | Soybean | plastid | 7.72 | 20.59 |
Protein Annotations
| EntrezGene:100797103 | Gene3D:3.30.530.20 | MapMan:35.2 | EMBL:ACUP02003337 | InterPro:COQ10_START | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_05G195900 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0031426 | UniProt:I1K531 |
| InterPro:IPR023393 | EnsemblPlants:KRH59638 | ProteinID:KRH59638 | ProteinID:KRH59638.1 | PFAM:PF03364 | PANTHER:PTHR34060 |
| PANTHER:PTHR34060:SF2 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | UniParc:UPI000233A281 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr5:-:38010671..38015701
Molecular Weight (calculated)
83125.6 Da
IEP (calculated)
6.569
GRAVY (calculated)
-0.510
Length
725 amino acids
Sequence
(BLAST)
(BLAST)
001: MITTCRTSST TNLGGAQPLS LRFLSKPAPP FLSLSLFFPS HSTNNGIAVS STQCKPRIRC DKEVGNGNSN GVEEEAKDEE GEREVQCEVQ VVSWRERRVK
101: AEISVNADIE SVWNALTDYE HLADFIPNLV WSGKIPCPYP GRIWLEQRGF QRSMYWHIEA RVVLDLQEFI NSAWDRELHF SMVDGDFKKF EGKWSVKSGT
201: RSSSTNLSYE VNVIPRFNFP AIFLERIIRS DLPVNLRALA YRVERNISGN QKLSLPENHL DKTSSDIYES SAQKINSALC ENREYLVSSI PGTLPMPSSE
301: VNINNWGAFG KTCRLDRPCV VDEIHLRRFD GLLENGGVHR CVFATITVKA SVRDVWNVMS SYETLPEIVP NLAISKILSR DNNKVRILQE GCKGLLYMVL
401: HARVVLDLCE YLEQEISFEQ VEGDFDSFHG KWTFEQLGNH HTLLKYSVES KMRKDTFLSE AIMEEVIYED LPSNLCAIRD YIENRTASNM FEACKQNTDL
501: GQQTVPSGFE DDDSYCSAED LFDCNAQSSS QQRPRVPGLQ RDIEVLKSEL LKFIAEHGQE GFMPMRKQLR LHGRVDIEKA INRMGGFRKI ATIMNLSLAY
601: KHRKPKGYWD NLENLHYEIS RFQRSWGMDP SFMPSRRSFE RAGRFDIARA LEKWGGLRQV SRLLSLKVRR QRSRQDNLAK DKKVDDDVAS PDVDSEIKTP
701: SRPTVSQDPQ NWLTELKQLD INWVE
101: AEISVNADIE SVWNALTDYE HLADFIPNLV WSGKIPCPYP GRIWLEQRGF QRSMYWHIEA RVVLDLQEFI NSAWDRELHF SMVDGDFKKF EGKWSVKSGT
201: RSSSTNLSYE VNVIPRFNFP AIFLERIIRS DLPVNLRALA YRVERNISGN QKLSLPENHL DKTSSDIYES SAQKINSALC ENREYLVSSI PGTLPMPSSE
301: VNINNWGAFG KTCRLDRPCV VDEIHLRRFD GLLENGGVHR CVFATITVKA SVRDVWNVMS SYETLPEIVP NLAISKILSR DNNKVRILQE GCKGLLYMVL
401: HARVVLDLCE YLEQEISFEQ VEGDFDSFHG KWTFEQLGNH HTLLKYSVES KMRKDTFLSE AIMEEVIYED LPSNLCAIRD YIENRTASNM FEACKQNTDL
501: GQQTVPSGFE DDDSYCSAED LFDCNAQSSS QQRPRVPGLQ RDIEVLKSEL LKFIAEHGQE GFMPMRKQLR LHGRVDIEKA INRMGGFRKI ATIMNLSLAY
601: KHRKPKGYWD NLENLHYEIS RFQRSWGMDP SFMPSRRSFE RAGRFDIARA LEKWGGLRQV SRLLSLKVRR QRSRQDNLAK DKKVDDDVAS PDVDSEIKTP
701: SRPTVSQDPQ NWLTELKQLD INWVE
001: MSVSKFPHLS HGVHTINFLN EPVFLSVLLP SPSRIRVFSS ISTSGIGGGV AKCHGTRHSG AGGRGDNGLR RDSGLGFDER GERKVRCEVD VISWRERRIR
101: GEIWVDSDSQ SVWNVLTDYE RLADFIPNLV WSGRIPCPHP GRIWLEQRGL QRALYWHIEA RVVLDLHECL DSPNGRELHF SMVDGDFKKF EGKWSVKSGI
201: RSVGTVLSYE VNVIPRFNFP AIFLERIIRS DLPVNLRAVA RQAEKIYKDC GKPSIIEDLL GIISSQPAPS NGIEFDSLAT ERSVASSVGS LAHSNELNNN
301: WGVYGKACKL DKPCTVDEVH LRRFDGLLEN GGVHRCAVAS ITVKAPVCEV WKVLTSYESL PEIVPNLAIS KILSRDNNKV RILQEGCKGL LYMVLHARAV
401: LDLHEIREQE IRFEQVEGDF DSLEGKWIFE QLGSHHTLLK YTVESKMRKD SFLSEAIMEE VIYEDLPSNL CAIRDYIEKR GEKSSESCKL ETCQVSEETC
501: SSSRAKSVET VYNNDDGSDQ TKQRRRIPGL QRDIEVLKSE ILKFISEHGQ EGFMPMRKQL RLHGRVDIEK AITRMGGFRR IALMMNLSLA YKHRKPKGYW
601: DNLENLQEEI GRFQQSWGMD PSFMPSRKSF ERAGRYDIAR ALEKWGGLHE VSRLLALNVR HPNRQLNSRK DNGNTILRTE STEADLNSTV NKNNKPYVSQ
701: DTEKWLYNLK DLDINWVQY
101: GEIWVDSDSQ SVWNVLTDYE RLADFIPNLV WSGRIPCPHP GRIWLEQRGL QRALYWHIEA RVVLDLHECL DSPNGRELHF SMVDGDFKKF EGKWSVKSGI
201: RSVGTVLSYE VNVIPRFNFP AIFLERIIRS DLPVNLRAVA RQAEKIYKDC GKPSIIEDLL GIISSQPAPS NGIEFDSLAT ERSVASSVGS LAHSNELNNN
301: WGVYGKACKL DKPCTVDEVH LRRFDGLLEN GGVHRCAVAS ITVKAPVCEV WKVLTSYESL PEIVPNLAIS KILSRDNNKV RILQEGCKGL LYMVLHARAV
401: LDLHEIREQE IRFEQVEGDF DSLEGKWIFE QLGSHHTLLK YTVESKMRKD SFLSEAIMEE VIYEDLPSNL CAIRDYIEKR GEKSSESCKL ETCQVSEETC
501: SSSRAKSVET VYNNDDGSDQ TKQRRRIPGL QRDIEVLKSE ILKFISEHGQ EGFMPMRKQL RLHGRVDIEK AITRMGGFRR IALMMNLSLA YKHRKPKGYW
601: DNLENLQEEI GRFQQSWGMD PSFMPSRKSF ERAGRYDIAR ALEKWGGLHE VSRLLALNVR HPNRQLNSRK DNGNTILRTE STEADLNSTV NKNNKPYVSQ
701: DTEKWLYNLK DLDINWVQY
Arabidopsis Description
At5g08720 [Source:UniProtKB/TrEMBL;Acc:Q9C5A5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.