Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- peroxisome 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH03376 | Soybean | nucleus | 91.94 | 93.72 |
| KRH63457 | Soybean | cytosol | 69.67 | 72.06 |
| KRH54462 | Soybean | cytosol | 68.25 | 70.59 |
| Bra033773.1-P | Field mustard | nucleus | 56.87 | 66.67 |
| CDY54257 | Canola | cytosol, nucleus, peroxisome | 57.35 | 66.12 |
| CDY68129 | Canola | cytosol, nucleus, plastid | 55.92 | 65.92 |
| Bra018084.1-P | Field mustard | cytosol, nucleus, plastid | 55.92 | 65.92 |
| CDY21807 | Canola | cytosol, nucleus, peroxisome | 57.35 | 65.76 |
| AT3G48100.1 | Thale cress | cytosol | 56.87 | 65.22 |
| AT5G62920.1 | Thale cress | cytosol | 57.35 | 65.05 |
| CDY70164 | Canola | nucleus | 56.4 | 65.03 |
| CDY59856 | Canola | cytosol, nucleus, peroxisome | 56.4 | 65.03 |
| CDY36905 | Canola | nucleus | 56.4 | 65.03 |
| Solyc03g113720.2.1 | Tomato | nucleus | 57.82 | 62.56 |
| PGSC0003DMT400063187 | Potato | cytosol | 58.77 | 62.0 |
| CDX73122 | Canola | cytosol, golgi, nucleus | 51.66 | 61.58 |
| KRH53721 | Soybean | cytosol | 39.34 | 61.03 |
| CDY45402 | Canola | cytosol, golgi, peroxisome | 52.61 | 60.33 |
| KRH64213 | Soybean | cytosol | 41.71 | 60.27 |
| Bra015885.1-P | Field mustard | cytosol, golgi, peroxisome | 52.61 | 60.0 |
| CDX84366 | Canola | nucleus | 53.55 | 59.47 |
| CDY00336 | Canola | nucleus | 53.55 | 59.47 |
| Bra010132.1-P | Field mustard | nucleus | 53.55 | 59.47 |
| AT1G74890.1 | Thale cress | nucleus | 55.45 | 56.8 |
| Bra019524.1-P | Field mustard | cytosol | 36.02 | 56.72 |
| CDX96681 | Canola | cytosol | 55.45 | 56.52 |
| Bra016526.1-P | Field mustard | cytosol | 55.45 | 56.52 |
| AT1G19050.1 | Thale cress | cytosol | 54.03 | 55.34 |
| Bra003782.1-P | Field mustard | cytosol | 51.66 | 55.33 |
| CDX68161 | Canola | cytosol | 51.66 | 55.33 |
| CDX83788 | Canola | cytosol | 55.45 | 55.19 |
| CDY26701 | Canola | nucleus | 55.45 | 54.93 |
| Bra025708.1-P | Field mustard | nucleus | 55.45 | 54.93 |
| CDY41014 | Canola | nucleus | 55.45 | 54.67 |
| VIT_17s0000g07580.t01 | Wine grape | cytosol, nucleus, plastid | 63.51 | 51.94 |
| CDX85860 | Canola | endoplasmic reticulum, golgi, vacuole | 51.66 | 50.0 |
| KRH69443 | Soybean | nucleus | 55.45 | 48.75 |
| KRH13391 | Soybean | nucleus | 40.76 | 48.04 |
| KRH45761 | Soybean | nucleus | 50.71 | 47.98 |
| KRH74701 | Soybean | nucleus | 55.45 | 47.95 |
| KRG99225 | Soybean | nucleus | 50.24 | 47.75 |
| KRH30056 | Soybean | nucleus | 42.18 | 47.59 |
| KRH20737 | Soybean | nucleus | 40.28 | 47.49 |
| KRH62857 | Soybean | nucleus | 39.81 | 45.41 |
| KRH18706 | Soybean | nucleus | 38.39 | 38.03 |
| KRH66808 | Soybean | nucleus | 44.08 | 37.5 |
| KRG95133 | Soybean | nucleus | 43.6 | 37.4 |
| KRH64643 | Soybean | nucleus | 41.23 | 37.02 |
| KRH53261 | Soybean | nucleus | 40.28 | 36.64 |
Protein Annotations
| EntrezGene:100527518 | MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | EMBL:ACUP02002805 | InterPro:CheY-like_superfamily | EnsemblPlantsGene:GLYMA_05G033000 |
| GO:GO:0000160 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | UniProt:I1JZW0 | InterPro:IPR001789 | EnsemblPlants:KRH57009 | ProteinID:KRH57009 |
| ProteinID:KRH57009.1 | PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF17 | SMART:SM00448 |
| SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI00023BF978 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr5:-:2882076..2884630
Molecular Weight (calculated)
23189.3 Da
IEP (calculated)
8.190
GRAVY (calculated)
-0.138
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MAITGEIFRQ SIKEMLEESP SGAPELQVLA VDDSLVDRKV IERLLRISSC KVTVVESGTR ALQYLGLDGG NSSLGFDSVK VNLIMTDYSM PGMTGYELLK
101: KIKQESSVFR EIPVVIMSSE NVLTRIDRCL EEGAEDFLLK PVKLSDVRRL KDFIMKGKVK EGEKISNKRM RSIDCSPPLT ATCSPVSLPC DPPSSSSSSL
201: LSPLSSKKAR L
101: KIKQESSVFR EIPVVIMSSE NVLTRIDRCL EEGAEDFLLK PVKLSDVRRL KDFIMKGKVK EGEKISNKRM RSIDCSPPLT ATCSPVSLPC DPPSSSSSSL
201: LSPLSSKKAR L
001: MAEVLRPEML DISNDTSSLA SPKLLHVLAV DDSMVDRKFI ERLLRVSSCK VTVVDSATRA LQYLGLDGEN NSSVGFEDLK INLIMTDYSM PGMTGYELLK
101: KIKESSAFRE IPVVIMSSEN ILPRIDRCLE EGAEDFLLKP VKLADVKRLR DSLMKAEERA FKNIMHKREL EANDIYSQLK RAKI
101: KIKESSAFRE IPVVIMSSEN ILPRIDRCLE EGAEDFLLKP VKLADVKRLR DSLMKAEERA FKNIMHKREL EANDIYSQLK RAKI
Arabidopsis Description
ARR5Response reactor 2 [Source:UniProtKB/TrEMBL;Acc:Q0WW39]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.