Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92510 | Soybean | nucleus | 55.02 | 82.38 |
| KRH77624 | Soybean | nucleus | 81.31 | 78.86 |
| KRH63038 | Soybean | nucleus | 20.07 | 47.54 |
| KRH41287 | Soybean | nucleus | 47.4 | 46.76 |
| KRH60010 | Soybean | nucleus | 48.79 | 42.22 |
| Solyc08g081960.1.1 | Tomato | nucleus | 48.44 | 41.3 |
| PGSC0003DMT400032058 | Potato | nucleus | 48.1 | 41.12 |
| CDY10965 | Canola | nucleus | 40.83 | 39.86 |
| KRH64510 | Soybean | nucleus, plastid | 43.94 | 39.2 |
| Bra019270.1-P | Field mustard | nucleus | 40.83 | 38.06 |
| AT4G11140.1 | Thale cress | nucleus | 37.37 | 37.63 |
| CDX94215 | Canola | nucleus | 40.83 | 37.58 |
| CDY47623 | Canola | nucleus | 40.83 | 37.46 |
| Bra013730.1-P | Field mustard | nucleus | 40.83 | 37.46 |
| CDY03521 | Canola | nucleus | 40.83 | 36.65 |
| KRH53432 | Soybean | nucleus | 44.64 | 36.54 |
| KRH07295 | Soybean | nucleus | 34.26 | 36.13 |
| AT4G23750.1 | Thale cress | nucleus | 42.21 | 35.57 |
| KRH18134 | Soybean | nucleus | 39.1 | 33.73 |
| KRH15980 | Soybean | nucleus | 38.06 | 33.64 |
| KRH66264 | Soybean | nucleus | 32.87 | 33.57 |
| CDX90774 | Canola | nucleus | 31.49 | 32.85 |
| CDY05133 | Canola | nucleus | 31.49 | 32.85 |
| Bra000736.1-P | Field mustard | nucleus | 30.8 | 32.6 |
| KRH72836 | Soybean | nucleus | 30.1 | 32.1 |
| KRG97126 | Soybean | nucleus | 32.18 | 31.74 |
| KRH68876 | Soybean | nucleus | 32.53 | 31.23 |
| KRH30664 | Soybean | nucleus | 28.03 | 29.78 |
| KRH17205 | Soybean | nucleus | 28.37 | 29.08 |
| KRH41626 | Soybean | nucleus | 15.92 | 27.88 |
| KRG98122 | Soybean | nucleus | 19.38 | 24.24 |
| KRH39204 | Soybean | nucleus | 13.84 | 23.67 |
| KRH35957 | Soybean | nucleus | 25.95 | 21.13 |
| KRH48474 | Soybean | nucleus | 22.49 | 20.77 |
| KRH43430 | Soybean | nucleus | 24.22 | 20.71 |
| KRG90812 | Soybean | nucleus | 26.3 | 20.65 |
| KRH45262 | Soybean | nucleus | 24.91 | 19.78 |
| KRH75373 | Soybean | nucleus, plastid | 24.57 | 19.14 |
| KRH04558 | Soybean | nucleus | 23.88 | 18.6 |
Protein Annotations
| EntrezGene:100779905 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EMBL:ACUP02006734 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| InterPro:DNA-bd_dom_sf | EnsemblPlantsGene:GLYMA_11G019000 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| UniProt:I1LGA6 | InterPro:IPR001471 | InterPro:IPR036955 | EnsemblPlants:KRH27859 | ProteinID:KRH27859 | ProteinID:KRH27859.1 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF43 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI000233C853 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr11:-:1331627..1333406
Molecular Weight (calculated)
33024.0 Da
IEP (calculated)
5.789
GRAVY (calculated)
-0.817
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAPPTKYTH HTKLLIPPEE DPPKHHYPRL VRITVTDTDA TDSSSDEEEE QTYHCNSSTR HRHRKFVNEI SIESCSSEND GVVSRKRIRR RSTTTPKATR
101: ASDTRRVSDG KKFRGVRQRP WGKWAAEIRD PARRVRLWLG TYDTAEEAAL VYDNAAIKLR GPHALTNFIT PPSGEETHCN SKNIFSPTSV LHCCSLSEEA
201: ESVTAKDDDY SSVSENKVKA ESAFPPEIDF EFRACSTVPE SLLFCDDDWS SEFLNSYEDF GFKSWHTDRN RDFFQDIDDL FVSDPLLAL
101: ASDTRRVSDG KKFRGVRQRP WGKWAAEIRD PARRVRLWLG TYDTAEEAAL VYDNAAIKLR GPHALTNFIT PPSGEETHCN SKNIFSPTSV LHCCSLSEEA
201: ESVTAKDDDY SSVSENKVKA ESAFPPEIDF EFRACSTVPE SLLFCDDDWS SEFLNSYEDF GFKSWHTDRN RDFFQDIDDL FVSDPLLAL
001: MEAEKKMVLP RIKFTEHKTN TTTIVSELTN THQTRILRIS VTDPDATDSS SDDEEEEHQR FVSKRRRVKK FVNEVYLDSG AVVTGSCGQM ESKKRQKRAV
101: KSESTVSPVV SATTTTTGEK KFRGVRQRPW GKWAAEIRDP LKRVRLWLGT YNTAEEAAMV YDNAAIQLRG PDALTNFSVT PTTATEKKAP PPSPVKKKKK
201: KNNKSKKSVT ASSSISRSSS NDCLCSPVSV LRSPFAVDEF SGISSSPVAA VVVKEEPSMT TVSETFSDFS APLFSDDDVF DFRSSVVPDY LGGDLFGEDL
301: FTADMCTDMN FGFDFGSGLS SWHMEDHFQD IGDLFGSDPL LAV
101: KSESTVSPVV SATTTTTGEK KFRGVRQRPW GKWAAEIRDP LKRVRLWLGT YNTAEEAAMV YDNAAIQLRG PDALTNFSVT PTTATEKKAP PPSPVKKKKK
201: KNNKSKKSVT ASSSISRSSS NDCLCSPVSV LRSPFAVDEF SGISSSPVAA VVVKEEPSMT TVSETFSDFS APLFSDDDVF DFRSSVVPDY LGGDLFGEDL
301: FTADMCTDMN FGFDFGSGLS SWHMEDHFQD IGDLFGSDPL LAV
Arabidopsis Description
CRF2Ethylene-responsive transcription factor CRF2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUQ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.