Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH60010 | Soybean | nucleus | 90.78 | 79.64 |
| KRH63038 | Soybean | nucleus | 20.14 | 48.36 |
| KRG92510 | Soybean | nucleus | 31.74 | 48.19 |
| KRH27859 | Soybean | nucleus | 46.76 | 47.4 |
| KRH77624 | Soybean | nucleus | 47.44 | 46.64 |
| CDY10965 | Canola | nucleus | 41.3 | 40.88 |
| Bra019270.1-P | Field mustard | nucleus | 41.3 | 39.03 |
| CDX94215 | Canola | nucleus | 41.64 | 38.85 |
| AT4G11140.1 | Thale cress | nucleus | 37.88 | 38.68 |
| KRH64510 | Soybean | nucleus, plastid | 42.66 | 38.58 |
| PGSC0003DMT400032058 | Potato | nucleus | 44.37 | 38.46 |
| Solyc08g081960.1.1 | Tomato | nucleus | 44.03 | 38.05 |
| KRH53432 | Soybean | nucleus | 45.05 | 37.39 |
| AT4G23750.1 | Thale cress | nucleus | 43.0 | 36.73 |
| CDY03521 | Canola | nucleus | 40.27 | 36.65 |
| Bra013730.1-P | Field mustard | nucleus | 39.25 | 36.51 |
| CDY47623 | Canola | nucleus | 39.25 | 36.51 |
| KRH15980 | Soybean | nucleus | 38.91 | 34.86 |
| CDX90774 | Canola | nucleus | 32.76 | 34.66 |
| KRH18134 | Soybean | nucleus | 39.25 | 34.33 |
| KRH07295 | Soybean | nucleus | 32.08 | 34.31 |
| CDY05133 | Canola | nucleus | 32.42 | 34.3 |
| Bra000736.1-P | Field mustard | nucleus | 31.74 | 34.07 |
| KRH68876 | Soybean | nucleus | 33.11 | 32.23 |
| KRH66264 | Soybean | nucleus | 31.06 | 32.16 |
| KRH30664 | Soybean | nucleus | 29.01 | 31.25 |
| KRG97126 | Soybean | nucleus | 31.06 | 31.06 |
| KRH72836 | Soybean | nucleus | 27.99 | 30.26 |
| KRH17205 | Soybean | nucleus | 28.67 | 29.79 |
| KRH41626 | Soybean | nucleus | 16.38 | 29.09 |
| KRH39204 | Soybean | nucleus | 14.33 | 24.85 |
| KRG98122 | Soybean | nucleus | 18.77 | 23.81 |
| KRH48474 | Soybean | nucleus | 22.18 | 20.77 |
| KRH35957 | Soybean | nucleus | 22.87 | 18.87 |
| KRH43430 | Soybean | nucleus | 21.5 | 18.64 |
| KRG90812 | Soybean | nucleus | 23.21 | 18.48 |
| KRH75373 | Soybean | nucleus, plastid | 23.21 | 18.33 |
| KRH45262 | Soybean | nucleus | 21.84 | 17.58 |
| KRH04558 | Soybean | nucleus | 20.14 | 15.9 |
Protein Annotations
| EntrezGene:100776453 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | ProteinID:ACJ61507.1 | EMBL:ACUP02004759 | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | EnsemblPlantsGene:GLYMA_08G020900 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | UniProt:I1KPI0 | InterPro:IPR001471 | InterPro:IPR036955 | EnsemblPlants:KRH41287 | ProteinID:KRH41287 |
| ProteinID:KRH41287.1 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF14 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000233841F | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr8:+:1695793..1697641
Molecular Weight (calculated)
32591.1 Da
IEP (calculated)
5.995
GRAVY (calculated)
-0.538
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSIKHTH HLNRTKLFMK EETLLKKKHH YPKIIRIRVT DADATDSSSD DDEPSMSSTR RRVKNFVNEI TIQGGGGGGG DVNVVSKKRR FKSGAGAPLC
101: RRKTGAKKFR GVRQRPWGKW AAEIRDPSRR VRLWLGTYDT AEEAAIVYDN AAIQLRGADA LTNFITPPPE NRKTGYCSGE ESRNNDDLRS PTSVLGRCSV
201: SEEAVTANDV FGGSSECEYS CVSESVFPIP NEVVFDFEST LDMFDEGINN VVAETSIFLA EDLDLGFTSW HRECDNFQDI GGDLFVWDPL VAL
101: RRKTGAKKFR GVRQRPWGKW AAEIRDPSRR VRLWLGTYDT AEEAAIVYDN AAIQLRGADA LTNFITPPPE NRKTGYCSGE ESRNNDDLRS PTSVLGRCSV
201: SEEAVTANDV FGGSSECEYS CVSESVFPIP NEVVFDFEST LDMFDEGINN VVAETSIFLA EDLDLGFTSW HRECDNFQDI GGDLFVWDPL VAL
001: METEKKVSLP RILRISVTDP YATDSSSDEE EEVDFDALST KRRRVKKYVK EVVLDSVVSD KEKPMKKKRK KRVVTVPVVV TTATRKFRGV RQRPWGKWAA
101: EIRDPSRRVR VWLGTFDTAE EAAIVYDNAA IQLRGPNAEL NFPPPPVTEN VEEASTEVKG VSDFIIGGGE CLRSPVSVLE SPFSGESTAV KEEFVGVSTA
201: EIVVKKEPSF NGSDFSAPLF SDDDVFGFST SMSESFGGDL FGDNLFADMS FGSGFGFGSG SGFSSWHVED HFQDIGDLFG SDPVLTV
101: EIRDPSRRVR VWLGTFDTAE EAAIVYDNAA IQLRGPNAEL NFPPPPVTEN VEEASTEVKG VSDFIIGGGE CLRSPVSVLE SPFSGESTAV KEEFVGVSTA
201: EIVVKKEPSF NGSDFSAPLF SDDDVFGFST SMSESFGGDL FGDNLFADMS FGSGFGFGSG SGFSSWHVED HFQDIGDLFG SDPVLTV
Arabidopsis Description
CRF1Ethylene-responsive transcription factor CRF1 [Source:UniProtKB/Swiss-Prot;Acc:O82503]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.