CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92510	Soybean	nucleus	37.7	23.83
KRH41287	Soybean	nucleus	48.36	20.14
KRH27859	Soybean	nucleus	47.54	20.07
KRH77624	Soybean	nucleus	47.54	19.46
KRH64510	Soybean	nucleus, plastid	49.18	18.52
KRH60010	Soybean	nucleus	50.0	18.26
KRH53432	Soybean	nucleus	51.64	17.85
KRG97126	Soybean	nucleus	40.98	17.06
KRH07295	Soybean	nucleus	37.7	16.79
KRH72836	Soybean	nucleus	36.89	16.61
KRH68876	Soybean	nucleus	40.16	16.28
KRH66264	Soybean	nucleus	37.7	16.25
KRH15980	Soybean	nucleus	43.44	16.21
KRH18134	Soybean	nucleus	44.26	16.12
KRH17205	Soybean	nucleus	36.89	15.96
KRH41626	Soybean	nucleus	20.49	15.15
KRH30664	Soybean	nucleus	33.61	15.07
KRG98122	Soybean	nucleus	22.13	11.69
KRH35957	Soybean	nucleus	31.15	10.7
KRH43430	Soybean	nucleus	29.51	10.65
KRH39204	Soybean	nucleus	14.75	10.65
KRG90812	Soybean	nucleus	31.97	10.6
KRH04558	Soybean	nucleus	31.97	10.51
KRH48474	Soybean	nucleus	25.41	9.9
KRH75373	Soybean	nucleus, plastid	28.69	9.43
KRH45262	Soybean	nucleus	27.05	9.07

Protein Annotations

Gene3D:3.30.730.10	MapMan:35.1	UniProt:A0A0R0K8K4	EMBL:ACUP02002581	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_04G151100	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KRH63038	ProteinID:KRH63038	ProteinID:KRH63038.1
PFAM:PF00847	PIRSF:PIRSF038123	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31194	PANTHER:PTHR31194:SF40
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0006EDF8F2	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:33448103..33448468

Molecular Weight (calculated)

13939.6 Da

IEP (calculated)

5.676

GRAVY (calculated)

-0.417

Length

122 amino acids

Sequence
(BLAST)

001: MRKKIIDPSS GKKFCGIRQR PWGKWATEIW DLARRMCLWL GTYETAEEAI MVYDDTIIRL RGSDALTNFM LPQRDSPSPL SVVAETPTEV CEMKVVVTEE
101: AFNSSYDSSE DHCHHKLSSP TL

Best Arabidopsis Sequence Match ( AT4G27950.1 )
(BLAST)

001: MMMDEFMDLR PVKYTEHKTV IRKYTKKSSM ERKTSVRDSA RLVRVSMTDR DATDSSSDEE EFLFPRRRVK RLINEIRVEP SSSSTGDVSA SPTKDRKRIN
101: VDSTVQKPSV SGQNQKKYRG VRQRPWGKWA AEIRDPEQRR RIWLGTFATA EEAAIVYDNA AIKLRGPDAL TNFTVQPEPE PVQEQEQEPE SNMSVSISES
201: MDDSQHLSSP TSVLNYQTYV SEEPIDSLIK PVKQEFLEPE QEPISWHLGE GNTNTNDDSF PLDITFLDNY FNESLPDISI FDQPMSPIQP TENDFFNDLM
301: LFDSNAEEYY SSEIKEIGSS FNDLDDSLIS DLLLV

Arabidopsis Description

CRF4Ethylene-responsive transcription factor CRF4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUE3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.