Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH27859 | Soybean | nucleus | 82.38 | 55.02 |
| KRH77624 | Soybean | nucleus | 80.31 | 52.01 |
| KRH63038 | Soybean | nucleus | 23.83 | 37.7 |
| KRH41287 | Soybean | nucleus | 48.19 | 31.74 |
| KRH60010 | Soybean | nucleus | 51.3 | 29.64 |
| KRH07295 | Soybean | nucleus | 41.45 | 29.2 |
| CDY10965 | Canola | nucleus | 44.56 | 29.05 |
| KRH66264 | Soybean | nucleus | 41.97 | 28.62 |
| KRH64510 | Soybean | nucleus, plastid | 47.67 | 28.4 |
| KRH30664 | Soybean | nucleus | 39.38 | 27.94 |
| Bra019270.1-P | Field mustard | nucleus | 44.56 | 27.74 |
| CDY03521 | Canola | nucleus | 46.11 | 27.64 |
| CDY47623 | Canola | nucleus | 45.08 | 27.62 |
| Bra013730.1-P | Field mustard | nucleus | 45.08 | 27.62 |
| AT4G11140.1 | Thale cress | nucleus | 40.93 | 27.53 |
| CDX94215 | Canola | nucleus | 44.56 | 27.39 |
| KRH72836 | Soybean | nucleus | 38.34 | 27.31 |
| KRH41626 | Soybean | nucleus | 23.32 | 27.27 |
| AT4G23750.1 | Thale cress | nucleus | 47.15 | 26.53 |
| KRH53432 | Soybean | nucleus | 47.67 | 26.06 |
| KRH15980 | Soybean | nucleus | 44.04 | 25.99 |
| KRH18134 | Soybean | nucleus | 45.08 | 25.97 |
| KRH17205 | Soybean | nucleus | 36.79 | 25.18 |
| Solyc08g081960.1.1 | Tomato | nucleus | 44.04 | 25.07 |
| PGSC0003DMT400032058 | Potato | nucleus | 43.52 | 24.85 |
| KRH68876 | Soybean | nucleus | 38.34 | 24.58 |
| KRG97126 | Soybean | nucleus | 37.31 | 24.57 |
| CDY05133 | Canola | nucleus | 32.12 | 22.38 |
| Bra000736.1-P | Field mustard | nucleus | 31.61 | 22.34 |
| CDX90774 | Canola | nucleus | 31.61 | 22.02 |
| KRG98122 | Soybean | nucleus | 24.87 | 20.78 |
| KRH39204 | Soybean | nucleus | 16.06 | 18.34 |
| KRH35957 | Soybean | nucleus | 31.09 | 16.9 |
| KRG90812 | Soybean | nucleus | 31.61 | 16.58 |
| KRH43430 | Soybean | nucleus | 29.02 | 16.57 |
| KRH04558 | Soybean | nucleus | 29.53 | 15.36 |
| KRH48474 | Soybean | nucleus | 24.35 | 15.02 |
| KRH45262 | Soybean | nucleus | 26.94 | 14.29 |
| KRH75373 | Soybean | nucleus, plastid | 27.46 | 14.29 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EMBL:ACUP02012760 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| InterPro:DNA-bd_dom_sf | EnsemblPlantsGene:GLYMA_20G215700 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| UniProt:I1NIF5 | InterPro:IPR001471 | InterPro:IPR036955 | EnsemblPlants:KRG92510 | ProteinID:KRG92510 | ProteinID:KRG92510.1 |
| PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF43 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00023DC67D | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr20:+:45163915..45164859
Molecular Weight (calculated)
21785.6 Da
IEP (calculated)
8.262
GRAVY (calculated)
-0.696
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPPTKYTH HTKLLIPPGP EEDPPKHPYP KLLRITVTDT DATDSSSDEE QTNFSTRHRH RKLINEISIA RASDTRRGQK FRGVRQRPLG KWSAEIRDPS
101: QRGVRLWLGT YNTAEEAALV YDNAAIKLRG PHALTNFITP LLNEDTHNKF LFSPTSVLHV SENKVKVRGC SPVPDSVLFC DDDWSSEFLT ASE
101: QRGVRLWLGT YNTAEEAALV YDNAAIKLRG PHALTNFITP LLNEDTHNKF LFSPTSVLHV SENKVKVRGC SPVPDSVLFC DDDWSSEFLT ASE
001: MMMDEFMDLR PVKYTEHKTV IRKYTKKSSM ERKTSVRDSA RLVRVSMTDR DATDSSSDEE EFLFPRRRVK RLINEIRVEP SSSSTGDVSA SPTKDRKRIN
101: VDSTVQKPSV SGQNQKKYRG VRQRPWGKWA AEIRDPEQRR RIWLGTFATA EEAAIVYDNA AIKLRGPDAL TNFTVQPEPE PVQEQEQEPE SNMSVSISES
201: MDDSQHLSSP TSVLNYQTYV SEEPIDSLIK PVKQEFLEPE QEPISWHLGE GNTNTNDDSF PLDITFLDNY FNESLPDISI FDQPMSPIQP TENDFFNDLM
301: LFDSNAEEYY SSEIKEIGSS FNDLDDSLIS DLLLV
101: VDSTVQKPSV SGQNQKKYRG VRQRPWGKWA AEIRDPEQRR RIWLGTFATA EEAAIVYDNA AIKLRGPDAL TNFTVQPEPE PVQEQEQEPE SNMSVSISES
201: MDDSQHLSSP TSVLNYQTYV SEEPIDSLIK PVKQEFLEPE QEPISWHLGE GNTNTNDDSF PLDITFLDNY FNESLPDISI FDQPMSPIQP TENDFFNDLM
301: LFDSNAEEYY SSEIKEIGSS FNDLDDSLIS DLLLV
Arabidopsis Description
CRF4Ethylene-responsive transcription factor CRF4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.