Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG97126 | Soybean | nucleus | 82.72 | 84.98 |
| KRH63038 | Soybean | nucleus | 16.28 | 40.16 |
| KRG92510 | Soybean | nucleus | 24.58 | 38.34 |
| PGSC0003DMT400091285 | Potato | nucleus | 18.27 | 37.41 |
| PGSC0003DMT400085012 | Potato | nucleus | 17.28 | 37.41 |
| KRH07295 | Soybean | nucleus | 33.22 | 36.5 |
| KRH66264 | Soybean | nucleus | 33.55 | 35.69 |
| Solyc01g014720.1.1 | Tomato | nucleus | 19.6 | 33.91 |
| KRH41287 | Soybean | nucleus | 32.23 | 33.11 |
| KRH27859 | Soybean | nucleus | 31.23 | 32.53 |
| Solyc01g095500.2.1 | Tomato | nucleus | 31.23 | 32.08 |
| Solyc01g008880.1.1 | Tomato | nucleus | 20.27 | 30.65 |
| KRH64510 | Soybean | nucleus, plastid | 32.89 | 30.56 |
| KRH77624 | Soybean | nucleus | 30.23 | 30.54 |
| KRH60010 | Soybean | nucleus | 33.22 | 29.94 |
| PGSC0003DMT400089361 | Potato | nucleus | 12.29 | 29.84 |
| PGSC0003DMT400000274 | Potato | nucleus | 29.57 | 29.67 |
| KRH30664 | Soybean | nucleus | 26.25 | 29.04 |
| KRH72836 | Soybean | nucleus | 25.91 | 28.78 |
| KRH53432 | Soybean | nucleus | 33.55 | 28.61 |
| KRH15980 | Soybean | nucleus | 30.23 | 27.83 |
| PGSC0003DMT400086990 | Potato | nucleus | 11.63 | 27.34 |
| KRH18134 | Soybean | nucleus | 30.23 | 27.16 |
| PGSC0003DMT400097578 | Potato | nucleus | 17.28 | 26.53 |
| KRH17205 | Soybean | nucleus | 24.58 | 26.24 |
| KRH41626 | Soybean | nucleus | 13.62 | 24.85 |
| KRH39204 | Soybean | nucleus | 12.29 | 21.89 |
| KRG98122 | Soybean | nucleus | 16.28 | 21.21 |
| KRH35957 | Soybean | nucleus | 23.92 | 20.28 |
| KRG90812 | Soybean | nucleus | 24.58 | 20.11 |
| KRH75373 | Soybean | nucleus, plastid | 23.26 | 18.87 |
| Solyc01g008890.2.1 | Tomato | nucleus | 18.94 | 18.81 |
| KRH43430 | Soybean | nucleus | 20.93 | 18.64 |
| PGSC0003DMT400058442 | Potato | nucleus | 20.6 | 18.02 |
| KRH45262 | Soybean | nucleus | 21.26 | 17.58 |
| KRH48474 | Soybean | nucleus | 18.27 | 17.57 |
| KRH04558 | Soybean | nucleus | 20.27 | 16.44 |
| PGSC0003DMT400089378 | Potato | nucleus | 15.28 | 13.53 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EMBL:ACUP02002125 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| InterPro:DNA-bd_dom_sf | EnsemblPlantsGene:GLYMA_03G255500 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| UniProt:I1JRX6 | InterPro:IPR001471 | InterPro:IPR036955 | EnsemblPlants:KRH68876 | ProteinID:KRH68876 | ProteinID:KRH68876.1 |
| PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF14 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00023C1CBD | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr3:+:45053105..45054320
Molecular Weight (calculated)
34215.9 Da
IEP (calculated)
4.799
GRAVY (calculated)
-0.568
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MYHSLHFMEA RFSERKVVTY KHVKPGDILN AAPKVVRISV MDPYATDDED EDEGLVIHPR MKKFVNEIRI VEKSSTNCES AGVNRTSNVS LRQHYKGKTG
101: DSLEKKRLRG VRQRPWGRWA AEIRDPVKRI RVWLGTYDTA EEAAMVYDKA AIAFRGSKAL TNFIKPPTRE DLCDCGPNET EASVAVSGEN DSSEESHLSS
201: PTSVLGLQSV ELMLDEVSET DLPSKEESSS QDSFLFLDSH SPSIDCYFNF ETLPPVFLHE TSITQQPDFH DKFSDISHLV NEDFQSWNWD IDSYFSDPLL
301: I
101: DSLEKKRLRG VRQRPWGRWA AEIRDPVKRI RVWLGTYDTA EEAAMVYDKA AIAFRGSKAL TNFIKPPTRE DLCDCGPNET EASVAVSGEN DSSEESHLSS
201: PTSVLGLQSV ELMLDEVSET DLPSKEESSS QDSFLFLDSH SPSIDCYFNF ETLPPVFLHE TSITQQPDFH DKFSDISHLV NEDFQSWNWD IDSYFSDPLL
301: I
001: MERRTRRVKF TENRTVTNVA ATPSNGSPRL VRITVTDPFA TDSSSDDDDN NNVTVVPRVK RYVKEIRFCQ GESSSSTAAR KGKHKEEESV VVEDDVSTSV
101: KPKKYRGVRQ RPWGKFAAEI RDPSSRTRIW LGTFVTAEEA AIAYDRAAIH LKGPKALTNF LTPPTPTPVI DLQTVSACDY GRDSRQSLHS PTSVLRFNVN
201: EETEHEIEAI ELSPERKSTV IKEEEESSAG LVFPDPYLLP DLSLAGECFW DTEIAPDLLF LDEETKIQST LLPNTEVSKQ GENETEDFEF GLIDDFESSP
301: WDVDHFFDHH HHSFD
101: KPKKYRGVRQ RPWGKFAAEI RDPSSRTRIW LGTFVTAEEA AIAYDRAAIH LKGPKALTNF LTPPTPTPVI DLQTVSACDY GRDSRQSLHS PTSVLRFNVN
201: EETEHEIEAI ELSPERKSTV IKEEEESSAG LVFPDPYLLP DLSLAGECFW DTEIAPDLLF LDEETKIQST LLPNTEVSKQ GENETEDFEF GLIDDFESSP
301: WDVDHFFDHH HHSFD
Arabidopsis Description
CRF6CRF6 [Source:UniProtKB/TrEMBL;Acc:A0A178VFH2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.