Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400091285 | Potato | nucleus | 87.05 | 82.31 |
| PGSC0003DMT400089361 | Potato | nucleus | 67.63 | 75.81 |
| PGSC0003DMT400086990 | Potato | nucleus | 63.31 | 68.75 |
| Solyc01g014720.1.1 | Tomato | nucleus | 80.58 | 64.37 |
| PGSC0003DMT400097578 | Potato | nucleus | 41.01 | 29.08 |
| PGSC0003DMT400058442 | Potato | nucleus | 70.5 | 28.49 |
| PGSC0003DMT400078294 | Potato | nucleus | 41.01 | 22.98 |
| KRH07295 | Soybean | nucleus | 43.88 | 22.26 |
| KRH66264 | Soybean | nucleus | 44.6 | 21.91 |
| PGSC0003DMT400000274 | Potato | nucleus | 41.01 | 19.0 |
| KRH68876 | Soybean | nucleus | 37.41 | 17.28 |
| KRG97126 | Soybean | nucleus | 35.97 | 17.06 |
| PGSC0003DMT400089378 | Potato | nucleus | 40.29 | 16.47 |
| PGSC0003DMT400006041 | Potato | nucleus | 43.17 | 16.04 |
| PGSC0003DMT400032058 | Potato | nucleus | 38.13 | 15.68 |
| PGSC0003DMT400086922 | Potato | mitochondrion, nucleus | 42.45 | 15.17 |
| PGSC0003DMT400037698 | Potato | nucleus | 30.94 | 12.5 |
| PGSC0003DMT400041053 | Potato | nucleus | 30.94 | 12.15 |
| PGSC0003DMT400014358 | Potato | nucleus | 30.94 | 11.05 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| UniProt:M1D8K0 | PFAM:PF00847 | EnsemblPlantsGene:PGSC0003DMG400034583 | PGSC:PGSC0003DMG400034583 | EnsemblPlants:PGSC0003DMT400085012 | PIRSF:PIRSF038123 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF43 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI000295DA57 | : | : | : | : | : |
Description
AP2 domain class transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400034583]
Coordinates
chr1:-:5274045..5274464
Molecular Weight (calculated)
16083.2 Da
IEP (calculated)
10.393
GRAVY (calculated)
-0.822
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MGERFVVLPH VVRIYITDND ATNSSSDEEE NLQGEMSKRH KRICKEIIIR NGKTNVTSKM VSSKEKTDTK LLQENVKNYR GVRQRKWGRW VAEIRDVRMN
101: KRRWLGSFDT ALEAALAYDK ATIELKGANA VKESNPIHH
101: KRRWLGSFDT ALEAALAYDK ATIELKGANA VKESNPIHH
001: MKRIIRISFT DAEATDSSSD EDTEERGGAS QTRRRGKRLV KEIVIDPSDS ADKLDVCKTR FKIRIPAEFL KTAKTEKKYR GVRQRPWGKW VAEIRCGRGA
101: CKGRRDRLWL GTFNTAEEAA LAYDNASIKL IGPHAPTNFG LPAENQEDKT VIGASEVARG A
101: CKGRRDRLWL GTFNTAEEAA LAYDNASIKL IGPHAPTNFG LPAENQEDKT VIGASEVARG A
Arabidopsis Description
ERF070Ethylene-responsive transcription factor ERF070 [Source:UniProtKB/Swiss-Prot;Acc:Q9C995]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.