Factsheet for PGSC0003DMT400089361

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400086990	Potato	nucleus	73.39	71.09
PGSC0003DMT400085012	Potato	nucleus	75.81	67.63
PGSC0003DMT400091285	Potato	nucleus	75.81	63.95
Solyc01g014720.1.1	Tomato	nucleus	70.16	50.0
PGSC0003DMT400058442	Potato	nucleus	61.29	22.09
PGSC0003DMT400097578	Potato	nucleus	34.68	21.94
KRH07295	Soybean	nucleus	37.9	17.15
KRH66264	Soybean	nucleus	38.71	16.96
PGSC0003DMT400078294	Potato	nucleus	33.87	16.94
PGSC0003DMT400000274	Potato	nucleus	34.68	14.33
PGSC0003DMT400006041	Potato	nucleus	38.71	12.83
KRH68876	Soybean	nucleus	29.84	12.29
KRG97126	Soybean	nucleus	29.03	12.29
PGSC0003DMT400032058	Potato	nucleus	32.26	11.83
PGSC0003DMT400086922	Potato	mitochondrion, nucleus	37.1	11.83
PGSC0003DMT400089378	Potato	nucleus	31.45	11.47
PGSC0003DMT400037698	Potato	nucleus	29.84	10.76
PGSC0003DMT400041053	Potato	nucleus	29.84	10.45
PGSC0003DMT400014358	Potato	nucleus	28.23	9.0

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:M1DI03
PFAM:PF00847	EnsemblPlantsGene:PGSC0003DMG400038932	PGSC:PGSC0003DMG400038932	EnsemblPlants:PGSC0003DMT400089361	PIRSF:PIRSF038123	PFscan:PS51032
PANTHER:PTHR31194	PANTHER:PTHR31194:SF43	UniParc:UPI000294E44A	SEG:seg	:	:

Description

Ethylene-responsive transcription factor ERF070 [Source:PGSC_GENE;Acc:PGSC0003DMG400038932]

Coordinates

chr00:-:35563799..35564173

Molecular Weight (calculated)

14628.0 Da

IEP (calculated)

10.673

GRAVY (calculated)

-0.755

Length

124 amino acids

Sequence
(BLAST)

001: MGKRSVVLPC VERIYITDND ATDSSSDEEE NLQGEKSKRH KRICKEIIIR NGKTKVTSKM VSSKEKKDTK LLQENVKKYM GVRQRKWGRW VAEIRDVRQI
101: NDVGWEVLTL RLKLLWLMTR LPLK

Best Arabidopsis Sequence Match ( AT4G27950.1 )
(BLAST)

001: MMMDEFMDLR PVKYTEHKTV IRKYTKKSSM ERKTSVRDSA RLVRVSMTDR DATDSSSDEE EFLFPRRRVK RLINEIRVEP SSSSTGDVSA SPTKDRKRIN
101: VDSTVQKPSV SGQNQKKYRG VRQRPWGKWA AEIRDPEQRR RIWLGTFATA EEAAIVYDNA AIKLRGPDAL TNFTVQPEPE PVQEQEQEPE SNMSVSISES
201: MDDSQHLSSP TSVLNYQTYV SEEPIDSLIK PVKQEFLEPE QEPISWHLGE GNTNTNDDSF PLDITFLDNY FNESLPDISI FDQPMSPIQP TENDFFNDLM
301: LFDSNAEEYY SSEIKEIGSS FNDLDDSLIS DLLLV

Arabidopsis Description

CRF4Ethylene-responsive transcription factor CRF4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUE3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.