Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH41287 | Soybean | nucleus | 79.64 | 90.78 |
| KRG92510 | Soybean | nucleus | 29.64 | 51.3 |
| KRH63038 | Soybean | nucleus | 18.26 | 50.0 |
| KRH27859 | Soybean | nucleus | 42.22 | 48.79 |
| KRH77624 | Soybean | nucleus | 41.62 | 46.64 |
| CDY10965 | Canola | nucleus | 35.93 | 40.54 |
| Bra019270.1-P | Field mustard | nucleus | 37.13 | 40.0 |
| PGSC0003DMT400032058 | Potato | nucleus | 40.12 | 39.65 |
| Solyc08g081960.1.1 | Tomato | nucleus | 39.82 | 39.23 |
| CDX94215 | Canola | nucleus | 36.53 | 38.85 |
| KRH64510 | Soybean | nucleus, plastid | 37.43 | 38.58 |
| KRH53432 | Soybean | nucleus | 40.42 | 38.24 |
| AT4G11140.1 | Thale cress | nucleus | 32.63 | 37.98 |
| CDY03521 | Canola | nucleus | 35.93 | 37.27 |
| CDY47623 | Canola | nucleus | 35.03 | 37.14 |
| Bra013730.1-P | Field mustard | nucleus | 35.03 | 37.14 |
| AT4G23750.1 | Thale cress | nucleus | 38.02 | 37.03 |
| KRH15980 | Soybean | nucleus | 35.03 | 35.78 |
| KRH18134 | Soybean | nucleus | 35.63 | 35.52 |
| KRH07295 | Soybean | nucleus | 28.74 | 35.04 |
| CDX90774 | Canola | nucleus | 27.84 | 33.57 |
| CDY05133 | Canola | nucleus | 27.84 | 33.57 |
| Bra000736.1-P | Field mustard | nucleus | 27.25 | 33.33 |
| KRH68876 | Soybean | nucleus | 29.94 | 33.22 |
| KRH66264 | Soybean | nucleus | 27.84 | 32.86 |
| KRH30664 | Soybean | nucleus | 26.05 | 31.99 |
| KRG97126 | Soybean | nucleus | 27.84 | 31.74 |
| KRH72836 | Soybean | nucleus | 25.15 | 31.0 |
| KRH17205 | Soybean | nucleus | 25.75 | 30.5 |
| KRH41626 | Soybean | nucleus | 14.37 | 29.09 |
| KRH39204 | Soybean | nucleus | 12.28 | 24.26 |
| KRG98122 | Soybean | nucleus | 16.77 | 24.24 |
| KRH48474 | Soybean | nucleus | 19.16 | 20.45 |
| KRH43430 | Soybean | nucleus | 20.36 | 20.12 |
| KRH35957 | Soybean | nucleus | 20.96 | 19.72 |
| KRG90812 | Soybean | nucleus | 21.26 | 19.29 |
| KRH75373 | Soybean | nucleus, plastid | 21.26 | 19.14 |
| KRH45262 | Soybean | nucleus | 20.36 | 18.68 |
| KRH04558 | Soybean | nucleus | 18.86 | 16.98 |
Protein Annotations
| EntrezGene:100813992 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EMBL:ACUP02003347 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| InterPro:DNA-bd_dom_sf | EnsemblPlantsGene:GLYMA_05G214400 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| UniProt:I1K6B5 | InterPro:IPR001471 | InterPro:IPR036955 | EnsemblPlants:KRH60010 | ProteinID:KRH60010 | ProteinID:KRH60010.1 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF14 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI00023C547D | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:39553567..39555383
Molecular Weight (calculated)
37204.1 Da
IEP (calculated)
5.057
GRAVY (calculated)
-0.588
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSIKNTH HLNRTKLFME EDTLLKKKRH YPKLIRIRVT DADATDSSSD DDEPSVSSTR RRVKYFVNEI TIQGGGGGGG CVNVVSRKRR FKAGAGAPSC
101: RRRTGAKKFR GVRQRPWGKW AAEIRDPLRR VRLWLGTYDT AEEAAIVYDN AAIQLRGADA LTNFVTPPRE NRKTGYCSGE ESRNNDLRSP TSVLGCRSVY
201: EEAESVTANA TGNDVVDESV TVVANDVVGP SSECEYSCVS EDSNNDKLKP ESVFPIPNDV VFDFQSTLDM FDEGINTNNN NNVAESSIFL AEDFDFKGSF
301: VNENLDLGFT SWHRECDNFQ DIGDLFVWDP LVAL
101: RRRTGAKKFR GVRQRPWGKW AAEIRDPLRR VRLWLGTYDT AEEAAIVYDN AAIQLRGADA LTNFVTPPRE NRKTGYCSGE ESRNNDLRSP TSVLGCRSVY
201: EEAESVTANA TGNDVVDESV TVVANDVVGP SSECEYSCVS EDSNNDKLKP ESVFPIPNDV VFDFQSTLDM FDEGINTNNN NNVAESSIFL AEDFDFKGSF
301: VNENLDLGFT SWHRECDNFQ DIGDLFVWDP LVAL
001: MEAEKKMVLP RIKFTEHKTN TTTIVSELTN THQTRILRIS VTDPDATDSS SDDEEEEHQR FVSKRRRVKK FVNEVYLDSG AVVTGSCGQM ESKKRQKRAV
101: KSESTVSPVV SATTTTTGEK KFRGVRQRPW GKWAAEIRDP LKRVRLWLGT YNTAEEAAMV YDNAAIQLRG PDALTNFSVT PTTATEKKAP PPSPVKKKKK
201: KNNKSKKSVT ASSSISRSSS NDCLCSPVSV LRSPFAVDEF SGISSSPVAA VVVKEEPSMT TVSETFSDFS APLFSDDDVF DFRSSVVPDY LGGDLFGEDL
301: FTADMCTDMN FGFDFGSGLS SWHMEDHFQD IGDLFGSDPL LAV
101: KSESTVSPVV SATTTTTGEK KFRGVRQRPW GKWAAEIRDP LKRVRLWLGT YNTAEEAAMV YDNAAIQLRG PDALTNFSVT PTTATEKKAP PPSPVKKKKK
201: KNNKSKKSVT ASSSISRSSS NDCLCSPVSV LRSPFAVDEF SGISSSPVAA VVVKEEPSMT TVSETFSDFS APLFSDDDVF DFRSSVVPDY LGGDLFGEDL
301: FTADMCTDMN FGFDFGSGLS SWHMEDHFQD IGDLFGSDPL LAV
Arabidopsis Description
CRF2Ethylene-responsive transcription factor CRF2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUQ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.