CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH18134	Soybean	nucleus	77.37	75.52
KRH64510	Soybean	nucleus, plastid	44.65	45.06
KRG92510	Soybean	nucleus	25.99	44.04
KRH63038	Soybean	nucleus	16.21	43.44
KRH53432	Soybean	nucleus	45.26	41.93
VIT_16s0050g02400.t01	Wine grape	nucleus	41.9	40.18
KRH41287	Soybean	nucleus	34.86	38.91
KRH27859	Soybean	nucleus	33.64	38.06
KRH77624	Soybean	nucleus	34.25	37.58
KRH07295	Soybean	nucleus	31.19	37.23
Solyc06g051840.1.1	Tomato	nucleus	39.45	36.86
KRH60010	Soybean	nucleus	35.78	35.03
PGSC0003DMT400006041	Potato	nucleus	40.06	35.03
KRH66264	Soybean	nucleus	29.97	34.63
PGSC0003DMT400086922	Potato	mitochondrion, nucleus	38.23	32.13
Solyc03g007460.1.1	Tomato	nucleus	38.23	31.57
KRH30664	Soybean	nucleus	25.99	31.25
KRG97126	Soybean	nucleus	27.22	30.38
KRH68876	Soybean	nucleus	27.83	30.23
KRH72836	Soybean	nucleus	24.77	29.89
KRH41626	Soybean	nucleus	14.98	29.7
KRH17205	Soybean	nucleus	25.38	29.43
KRG98122	Soybean	nucleus	17.74	25.11
KRH39204	Soybean	nucleus	12.54	24.26
KRH43430	Soybean	nucleus	23.55	22.78
KRH35957	Soybean	nucleus	23.85	21.97
KRH75373	Soybean	nucleus, plastid	24.77	21.83
KRG90812	Soybean	nucleus	24.46	21.74
KRH48474	Soybean	nucleus	20.8	21.73
KRH45262	Soybean	nucleus	23.85	21.43
KRH04558	Soybean	nucleus	21.71	19.14

Protein Annotations

EntrezGene:100805277	MapMan:15.5.7.1	Gene3D:3.30.730.10	EMBL:ACUP02008744	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_14G123900	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:K7M7A3	EnsemblPlants:KRH15980	ProteinID:KRH15980	ProteinID:KRH15980.1
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31194	PANTHER:PTHR31194:SF43	SMART:SM00380
SUPFAM:SSF54171	UniParc:UPI000233B6CF	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:18813346..18814329

Molecular Weight (calculated)

37037.7 Da

IEP (calculated)

4.983

GRAVY (calculated)

-0.574

Length

327 amino acids

Sequence
(BLAST)

001: MEQQNSILCK YTEHQTVMKK HMKSKDNTFC SPKVISISLI DPYATDSSSD EENVMRRRRV KRYVNRIELQ PAFKPVTTRK RHAGDAATLR KPPAKVTNSC
101: RKFRGVRQRP WGKWAAEIRD PVQRVRIWLG TFKTAEEAAL CYDNAAITLR GPDALTNFGR SRPEETPEKE EMVEKEEFTS GKPEMKVVVK PETQVSVSVS
201: GCYDSGDECC LNLSSPTSVL QFSAEPYKPD EPFPGSTETR TVVEECHGET VSFSDSSECI LKDMPWDDVF NFPVMFDEPL SHLFDETTPF SISDGFGDEK
301: FLPSSTLCQV DDYFQDILLG SDPLVVL

Best Arabidopsis Sequence Match ( AT4G27950.1 )
(BLAST)

001: MMMDEFMDLR PVKYTEHKTV IRKYTKKSSM ERKTSVRDSA RLVRVSMTDR DATDSSSDEE EFLFPRRRVK RLINEIRVEP SSSSTGDVSA SPTKDRKRIN
101: VDSTVQKPSV SGQNQKKYRG VRQRPWGKWA AEIRDPEQRR RIWLGTFATA EEAAIVYDNA AIKLRGPDAL TNFTVQPEPE PVQEQEQEPE SNMSVSISES
201: MDDSQHLSSP TSVLNYQTYV SEEPIDSLIK PVKQEFLEPE QEPISWHLGE GNTNTNDDSF PLDITFLDNY FNESLPDISI FDQPMSPIQP TENDFFNDLM
301: LFDSNAEEYY SSEIKEIGSS FNDLDDSLIS DLLLV

Arabidopsis Description

CRF4Ethylene-responsive transcription factor CRF4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUE3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.