Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- peroxisome 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH57009 | Soybean | nucleus | 93.72 | 91.94 |
| KRH63457 | Soybean | cytosol | 71.5 | 72.55 |
| KRH54462 | Soybean | cytosol | 69.57 | 70.59 |
| CDY68129 | Canola | cytosol, nucleus, plastid | 57.0 | 65.92 |
| Bra018084.1-P | Field mustard | cytosol, nucleus, plastid | 57.0 | 65.92 |
| Bra033773.1-P | Field mustard | nucleus | 57.0 | 65.56 |
| CDY54257 | Canola | cytosol, nucleus, peroxisome | 57.49 | 65.03 |
| CDY59856 | Canola | cytosol, nucleus, peroxisome | 57.49 | 65.03 |
| AT3G48100.1 | Thale cress | cytosol | 57.49 | 64.67 |
| CDY21807 | Canola | cytosol, nucleus, peroxisome | 57.49 | 64.67 |
| AT5G62920.1 | Thale cress | cytosol | 57.97 | 64.52 |
| CDY36905 | Canola | nucleus | 57.0 | 64.48 |
| CDY70164 | Canola | nucleus | 57.0 | 64.48 |
| Solyc03g113720.2.1 | Tomato | nucleus | 58.94 | 62.56 |
| CDX73122 | Canola | cytosol, golgi, nucleus | 53.14 | 62.15 |
| PGSC0003DMT400063187 | Potato | cytosol | 58.94 | 61.0 |
| CDY45402 | Canola | cytosol, golgi, peroxisome | 54.11 | 60.87 |
| Bra015885.1-P | Field mustard | cytosol, golgi, peroxisome | 54.11 | 60.54 |
| KRH53721 | Soybean | cytosol | 39.61 | 60.29 |
| KRH64213 | Soybean | cytosol | 42.03 | 59.59 |
| CDX84366 | Canola | nucleus | 54.11 | 58.95 |
| CDY00336 | Canola | nucleus | 54.11 | 58.95 |
| Bra010132.1-P | Field mustard | nucleus | 54.11 | 58.95 |
| AT1G74890.1 | Thale cress | nucleus | 57.49 | 57.77 |
| Bra019524.1-P | Field mustard | cytosol | 35.75 | 55.22 |
| CDX96681 | Canola | cytosol | 55.07 | 55.07 |
| Bra016526.1-P | Field mustard | cytosol | 55.07 | 55.07 |
| Bra003782.1-P | Field mustard | cytosol | 52.17 | 54.82 |
| CDX68161 | Canola | cytosol | 52.17 | 54.82 |
| CDX83788 | Canola | cytosol | 55.07 | 53.77 |
| CDY26701 | Canola | nucleus | 55.07 | 53.52 |
| Bra025708.1-P | Field mustard | nucleus | 55.07 | 53.52 |
| AT1G19050.1 | Thale cress | cytosol | 53.14 | 53.4 |
| CDY41014 | Canola | nucleus | 55.07 | 53.27 |
| VIT_17s0000g07580.t01 | Wine grape | cytosol, nucleus, plastid | 65.22 | 52.33 |
| CDX85860 | Canola | endoplasmic reticulum, golgi, vacuole | 53.14 | 50.46 |
| KRH13391 | Soybean | nucleus | 43.48 | 50.28 |
| KRH20737 | Soybean | nucleus | 43.0 | 49.72 |
| KRH69443 | Soybean | nucleus | 57.0 | 49.17 |
| KRH30056 | Soybean | nucleus | 43.96 | 48.66 |
| KRH74701 | Soybean | nucleus | 57.0 | 48.36 |
| KRH45761 | Soybean | nucleus | 51.69 | 47.98 |
| KRG99225 | Soybean | nucleus | 51.21 | 47.75 |
| KRH62857 | Soybean | nucleus | 42.03 | 47.03 |
| KRG95133 | Soybean | nucleus | 45.41 | 38.21 |
| KRH66808 | Soybean | nucleus | 45.41 | 37.9 |
| KRH18706 | Soybean | nucleus | 38.16 | 37.09 |
| KRH64643 | Soybean | nucleus | 41.06 | 36.17 |
| KRH53261 | Soybean | nucleus | 40.1 | 35.78 |
Protein Annotations
| EntrezGene:100796843 | MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | EMBL:ACUP02010345 | InterPro:CheY-like_superfamily | EnsemblPlantsGene:GLYMA_17G093900 |
| GO:GO:0000160 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | UniProt:I1MTM0 | InterPro:IPR001789 | EnsemblPlants:KRH03376 | ProteinID:KRH03376 |
| ProteinID:KRH03376.1 | PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF17 | SMART:SM00448 |
| SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI00023D5D53 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr17:+:7325964..7328324
Molecular Weight (calculated)
22846.1 Da
IEP (calculated)
7.845
GRAVY (calculated)
-0.067
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MAITGDIFRQ SITEMLAESP SGAPELHVLA VDDSLVDRKV IERLLKISSC KVTVVESGTR ALQYLGLEGE NGSLGFDSVK VNLIMTDYSM PGMTGYELLK
101: KIKQESSVFR EIPVVIMSSE NVLTRIDRCL EEGAEDFLLK PVKLSDVRRL KDFIMKGKVK EGEKISHKRM RSIDCSPPLT ATCSLLSLPC DPSPSLLSPL
201: STKKARL
101: KIKQESSVFR EIPVVIMSSE NVLTRIDRCL EEGAEDFLLK PVKLSDVRRL KDFIMKGKVK EGEKISHKRM RSIDCSPPLT ATCSLLSLPC DPSPSLLSPL
201: STKKARL
001: MAEVLRPEML DISNDTSSLA SPKLLHVLAV DDSMVDRKFI ERLLRVSSCK VTVVDSATRA LQYLGLDGEN NSSVGFEDLK INLIMTDYSM PGMTGYELLK
101: KIKESSAFRE IPVVIMSSEN ILPRIDRCLE EGAEDFLLKP VKLADVKRLR DSLMKAEERA FKNIMHKREL EANDIYSQLK RAKI
101: KIKESSAFRE IPVVIMSSEN ILPRIDRCLE EGAEDFLLKP VKLADVKRLR DSLMKAEERA FKNIMHKREL EANDIYSQLK RAKI
Arabidopsis Description
ARR5Response reactor 2 [Source:UniProtKB/TrEMBL;Acc:Q0WW39]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.