Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH45761 | Soybean | nucleus | 95.05 | 94.62 |
| VIT_01s0026g00940.t01 | Wine grape | nucleus | 67.12 | 67.42 |
| KRH69443 | Soybean | nucleus | 69.82 | 64.58 |
| KRH74701 | Soybean | nucleus | 69.37 | 63.11 |
| KRH53721 | Soybean | cytosol | 35.59 | 58.09 |
| KRH64213 | Soybean | cytosol | 36.04 | 54.79 |
| Bra027829.1-P | Field mustard | nucleus | 54.95 | 53.98 |
| CDY45155 | Canola | nucleus | 54.95 | 53.51 |
| CDY30913 | Canola | nucleus | 55.41 | 51.68 |
| PGSC0003DMT400058306 | Potato | nucleus | 57.21 | 51.21 |
| KRH03376 | Soybean | nucleus | 47.75 | 51.21 |
| Solyc05g006420.2.1 | Tomato | nucleus | 57.66 | 51.0 |
| KRH63457 | Soybean | cytosol | 46.85 | 50.98 |
| KRH57009 | Soybean | nucleus | 47.75 | 50.24 |
| CDY20630 | Canola | nucleus | 55.86 | 50.2 |
| KRH54462 | Soybean | cytosol | 45.95 | 50.0 |
| CDY20948 | Canola | nucleus | 56.31 | 49.41 |
| Bra018439.1-P | Field mustard | nucleus | 55.86 | 49.4 |
| AT1G10470.1 | Thale cress | nucleus | 57.21 | 49.03 |
| CDY37975 | Canola | nucleus | 54.5 | 47.83 |
| CDY66046 | Canola | nucleus | 54.05 | 47.43 |
| CDX93424 | Canola | nucleus | 54.05 | 47.43 |
| Bra019932.1-P | Field mustard | nucleus | 54.05 | 47.43 |
| CDY07801 | Canola | nucleus | 56.31 | 47.17 |
| Bra036963.1-P | Field mustard | nucleus | 55.41 | 47.13 |
| Bra031714.1-P | Field mustard | nucleus | 55.41 | 47.13 |
| KRH13391 | Soybean | nucleus | 37.84 | 46.93 |
| CDY34890 | Canola | nucleus | 54.5 | 46.54 |
| KRH20737 | Soybean | nucleus | 37.39 | 46.37 |
| KRH30056 | Soybean | nucleus | 38.74 | 45.99 |
| KRH62857 | Soybean | nucleus | 36.49 | 43.78 |
| AT1G59940.2 | Thale cress | golgi | 54.5 | 37.46 |
| KRH64643 | Soybean | nucleus | 39.19 | 37.02 |
| KRH53261 | Soybean | nucleus | 38.29 | 36.64 |
| KRH18706 | Soybean | nucleus | 34.68 | 36.15 |
| KRH66808 | Soybean | nucleus | 37.39 | 33.47 |
| KRG95133 | Soybean | nucleus | 36.94 | 33.33 |
Protein Annotations
| EntrezGene:100527828 | MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | EMBL:ACUP02011006 | EMBL:BT092707 | UniProt:C6T5J5 |
| InterPro:CheY-like_superfamily | EnsemblPlantsGene:GLYMA_18G130900 | GO:GO:0000160 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | InterPro:IPR001789 | EnsemblPlants:KRG99225 |
| ProteinID:KRG99225 | ProteinID:KRG99225.1 | PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF17 |
| SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI0001B15E25 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr18:-:18236345..18237480
Molecular Weight (calculated)
24662.7 Da
IEP (calculated)
5.025
GRAVY (calculated)
-0.305
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSNSVVSWP RMPENINGFG LKQNQSEEVH VLAVDDSTVD RKVIEHLLKV LACKVTAVDS GLRALQLLGL LDEQKIPSET NGFVGLKVDL IITDYCMPGM
101: TGYELLKRIK ESSTFKETPV VIMSSENVLP RIDRCLEEGA EDFIVKPVKL SDVKRLKDYM TTKEVRGELS QEEREGINKR KLLDTSDVSP SSPPSISSSP
201: LPSSLSSVID SPIRRLKMTN TD
101: TGYELLKRIK ESSTFKETPV VIMSSENVLP RIDRCLEEGA EDFIVKPVKL SDVKRLKDYM TTKEVRGELS QEEREGINKR KLLDTSDVSP SSPPSISSSP
201: LPSSLSSVID SPIRRLKMTN TD
001: MARDGGVSCL RRSEMMSVGG IGGIESAPLD LDEVHVLAVD DSLVDRIVIE RLLRITSCKV TAVDSGWRAL EFLGLDNEKA SAEFDRLKVD LIITDYCMPG
101: MTGYELLKKI KESSNFREVP VVIMSSENVL TRIDRCLEEG AQDFLLKPVK LADVKRLRSH LTKDVKLSNG NKRKLPEDSS SVNSSLPPPS PPLTISPESS
201: PPLTVSTESS DSSPPLSPVE IFSTSPLSSP IDDEDDDVLT SSSEESPIRR QKMRSPGLD
101: MTGYELLKKI KESSNFREVP VVIMSSENVL TRIDRCLEEG AQDFLLKPVK LADVKRLRSH LTKDVKLSNG NKRKLPEDSS SVNSSLPPPS PPLTISPESS
201: PPLTVSTESS DSSPPLSPVE IFSTSPLSSP IDDEDDDVLT SSSEESPIRR QKMRSPGLD
Arabidopsis Description
ARR4Two-component response regulator ARR4 [Source:UniProtKB/Swiss-Prot;Acc:O82798]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.