Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 4
- cytosol 1
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G57670.1 | KRG99225 | AT1G10470.1 | 18642946 |
| AT3G57670.1 | KRH45761 | AT1G10470.1 | 18642946 |
| AT3G57670.1 | KRH69443 | AT1G10470.1 | 18642946 |
| AT3G57670.1 | KRH74701 | AT1G10470.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH71956 | Soybean | nucleus, plastid | 89.9 | 93.53 |
| KRG95308 | Soybean | nucleus, plastid | 65.8 | 72.78 |
| KRH25207 | Soybean | nucleus | 27.72 | 72.3 |
| KRH66988 | Soybean | nucleus | 65.54 | 70.67 |
| PGSC0003DMT400077822 | Potato | nucleus | 53.89 | 65.41 |
| GSMUA_AchrUn_... | Banana | nucleus | 53.37 | 63.0 |
| CDX88959 | Canola | nucleus | 56.48 | 59.89 |
| Bra014612.1-P | Field mustard | nucleus, plastid | 56.22 | 59.62 |
| KRH18924 | Soybean | nucleus | 36.27 | 59.07 |
| KRH10191 | Soybean | nucleus, plastid | 52.33 | 58.55 |
| AT3G57670.1 | Thale cress | nucleus | 58.03 | 58.49 |
| KRH23146 | Soybean | nucleus, plastid | 51.81 | 57.14 |
| KRH29701 | Soybean | nucleus | 50.0 | 56.6 |
| KRH24697 | Soybean | nucleus, plastid | 49.74 | 56.3 |
| KRH16750 | Soybean | nucleus | 36.27 | 56.22 |
| KRH27491 | Soybean | nucleus, plastid | 50.26 | 55.11 |
| KRH20837 | Soybean | nucleus, plastid | 50.0 | 54.06 |
| TraesCS7A01G404400.1 | Wheat | nucleus | 51.3 | 53.8 |
| TraesCS7B01G304000.1 | Wheat | nucleus | 51.3 | 53.51 |
| KRH34760 | Soybean | nucleus | 37.82 | 53.48 |
| KRH43510 | Soybean | nucleus, plastid | 47.93 | 53.47 |
| GSMUA_Achr1P16530_001 | Banana | nucleus | 49.74 | 53.19 |
| TraesCS7D01G397800.1 | Wheat | nucleus | 50.78 | 52.97 |
| KRG92027 | Soybean | nucleus | 37.56 | 52.92 |
| KRH13927 | Soybean | nucleus, plastid | 46.37 | 52.34 |
| Zm00001d036812_P001 | Maize | nucleus | 51.3 | 50.9 |
| Zm00001d046774_P001 | Maize | nucleus | 52.07 | 50.5 |
| EER88644 | Sorghum | nucleus, plastid | 51.55 | 49.26 |
| KRH22690 | Soybean | nucleus | 39.64 | 47.96 |
| KRH26622 | Soybean | nucleus | 39.64 | 47.66 |
| KRH30442 | Soybean | nucleus | 40.67 | 47.58 |
| Solyc03g059270.2.1 | Tomato | nucleus | 41.71 | 47.08 |
| KRH75477 | Soybean | nucleus | 39.64 | 46.08 |
| KRH70598 | Soybean | nucleus | 39.38 | 45.51 |
| Os06t0612300-01 | Rice | endoplasmic reticulum, vacuole | 52.33 | 45.39 |
| KRH25208 | Soybean | nucleus, plastid | 13.47 | 29.71 |
| KRH22822 | Soybean | plastid | 17.1 | 23.74 |
| KRH59322 | Soybean | nucleus | 17.36 | 20.49 |
| KRG97571 | Soybean | nucleus, plastid | 17.88 | 20.41 |
| KRH43171 | Soybean | nucleus, plastid | 16.58 | 20.13 |
| KRH25115 | Soybean | nucleus | 19.95 | 19.44 |
| KRH30553 | Soybean | nucleus, plastid | 20.21 | 19.02 |
| KRH31302 | Soybean | nucleus, plastid | 17.62 | 18.68 |
| KRH26538 | Soybean | nucleus, plastid | 18.91 | 17.8 |
| KRH08551 | Soybean | nucleus, plastid | 22.54 | 16.7 |
| KRH34957 | Soybean | nucleus, plastid | 21.76 | 16.57 |
| KRG91822 | Soybean | nucleus, plastid | 21.5 | 16.31 |
Protein Annotations
| EMBL:ACUP02006235 | EnsemblPlants:KRH33045 | EnsemblPlantsGene:GLYMA_10G095100 | EntrezGene:100776343 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF98 |
| PFscan:PS50157 | ProteinID:KRH33045 | ProteinID:KRH33045.1 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI000233D6B4 | UniProt:I1L9X0 | MapMan:15.5.15 | : | : |
Description
hypothetical protein
Coordinates
chr10:-:13762452..13765446
Molecular Weight (calculated)
43841.5 Da
IEP (calculated)
6.349
GRAVY (calculated)
-0.944
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MADPYSNFFS PLGSNFFHYP SPSPSSQHHH PYAHNFLNQN GSNIINNNHN TFFHFHNFQT TICSSFSSSS SPPSPPLRVA LPLLTLSPKN EEEQEEDDDQ
101: EQDQDHEILQ DNFCTAMDVE ENYNNNRTLL HHLHPKEEEQ DQEDGPDETV TVALHIGLPS PSAAEIASVL SSACSTDQEQ QQQQQQQDGN NNNNGSDDFS
201: SSGFLSNRLN KGQYWIPTPS QILIGPTQFS CPVCCKTFNR YNNMQMHMWG HGSQYRKGPE SLRGTQPTGM LRLPCYCCSP GCRNNIDHPR AKPLKDFRTL
301: QTHYKRKHGI KPFMCRKCGK AFAVRGDWRT HEKNCGKLWY CICGSDFKHK RSLKDHIKAF GSGHAAYGID GFEEEEEPAS EVEQDR
101: EQDQDHEILQ DNFCTAMDVE ENYNNNRTLL HHLHPKEEEQ DQEDGPDETV TVALHIGLPS PSAAEIASVL SSACSTDQEQ QQQQQQQDGN NNNNGSDDFS
201: SSGFLSNRLN KGQYWIPTPS QILIGPTQFS CPVCCKTFNR YNNMQMHMWG HGSQYRKGPE SLRGTQPTGM LRLPCYCCSP GCRNNIDHPR AKPLKDFRTL
301: QTHYKRKHGI KPFMCRKCGK AFAVRGDWRT HEKNCGKLWY CICGSDFKHK RSLKDHIKAF GSGHAAYGID GFEEEEEPAS EVEQDR
001: MTDPYSNFFT DWFKSNPFHH YPNSSTNPSP HPLPPVTPPS SFFFFPQSGD LRRPPPPPTP PPSPPLREAL PLLSLSPANK QQDHHHNHDH LIQEPPSTSM
101: DVDYDHHHQD DHHNLDDDDH DVTVALHIGL PSPSAQEMAS LLMMSSSSSS SRTTHHHEDM NHKKDLDHEY SHGAVGGGED DDEDSVGGDG GCRISRLNKG
201: QYWIPTPSQI LIGPTQFSCP VCFKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTGMLR LPCYCCAPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGIKP
301: FMCRKCGKAF AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHGAYGIDGF DEEDEPASEV EQLDNDHESM QSK
101: DVDYDHHHQD DHHNLDDDDH DVTVALHIGL PSPSAQEMAS LLMMSSSSSS SRTTHHHEDM NHKKDLDHEY SHGAVGGGED DDEDSVGGDG GCRISRLNKG
201: QYWIPTPSQI LIGPTQFSCP VCFKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTGMLR LPCYCCAPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGIKP
301: FMCRKCGKAF AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHGAYGIDGF DEEDEPASEV EQLDNDHESM QSK
Arabidopsis Description
WIP2WIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VLW5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.