Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- peroxisome 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH26622 | Soybean | nucleus | 95.3 | 94.7 |
| KRH25207 | Soybean | nucleus | 42.32 | 91.22 |
| KRH30442 | Soybean | nucleus | 78.06 | 75.45 |
| VIT_06s0080g00270.t01 | Wine grape | plastid | 73.35 | 67.44 |
| GSMUA_Achr5P26210_001 | Banana | nucleus | 51.72 | 59.14 |
| PGSC0003DMT400018308 | Potato | nucleus, plastid | 59.25 | 57.98 |
| KRH18924 | Soybean | nucleus | 40.44 | 54.43 |
| CDY06308 | Canola | nucleus | 57.05 | 54.01 |
| KRH34760 | Soybean | nucleus | 45.77 | 53.48 |
| CDY22690 | Canola | nucleus | 56.43 | 53.41 |
| Bra031621.1-P | Field mustard | nucleus | 56.11 | 53.12 |
| CDX95075 | Canola | nucleus | 55.8 | 52.66 |
| KRH16750 | Soybean | nucleus | 41.07 | 52.61 |
| KRG92027 | Soybean | nucleus | 45.14 | 52.55 |
| Bra018638.1-P | Field mustard | nucleus | 55.49 | 52.52 |
| CDX93575 | Canola | nucleus | 55.17 | 52.23 |
| AT1G08290.1 | Thale cress | nucleus | 54.23 | 51.34 |
| KRH25208 | Soybean | nucleus, plastid | 26.02 | 47.43 |
| KRH24697 | Soybean | nucleus, plastid | 48.59 | 45.45 |
| KRH29701 | Soybean | nucleus | 48.28 | 45.16 |
| KRH13927 | Soybean | nucleus, plastid | 48.28 | 45.03 |
| KRH10191 | Soybean | nucleus, plastid | 48.28 | 44.64 |
| KRH43510 | Soybean | nucleus, plastid | 48.28 | 44.51 |
| KRH70598 | Soybean | nucleus | 46.08 | 44.01 |
| KRH75477 | Soybean | nucleus | 45.77 | 43.98 |
| KRH27491 | Soybean | nucleus, plastid | 48.28 | 43.75 |
| KRH23146 | Soybean | nucleus, plastid | 47.96 | 43.71 |
| KRG95308 | Soybean | nucleus, plastid | 47.34 | 43.27 |
| Solyc06g074360.2.1 | Tomato | nucleus | 28.53 | 43.13 |
| KRH20837 | Soybean | nucleus, plastid | 47.65 | 42.58 |
| KRH66988 | Soybean | nucleus | 47.65 | 42.46 |
| Os01t0859100-01 | Rice | nucleus, plastid | 49.84 | 42.29 |
| TraesCS3D01G364800.1 | Wheat | nucleus | 48.59 | 42.23 |
| KRH71956 | Soybean | nucleus, plastid | 48.59 | 41.78 |
| TraesCS3B01G404000.1 | Wheat | nucleus | 48.59 | 41.67 |
| Os05t0444200-01 | Rice | plastid | 49.22 | 40.36 |
| KRH33045 | Soybean | nucleus, plastid | 47.96 | 39.64 |
| EES18308 | Sorghum | plastid | 48.59 | 38.46 |
| TraesCS1B01G285900.1 | Wheat | nucleus, plastid | 44.51 | 38.38 |
| EES03920 | Sorghum | plastid | 48.28 | 38.21 |
| TraesCS1D01G276200.1 | Wheat | nucleus, plastid | 43.89 | 38.15 |
| Zm00001d038297_P001 | Maize | nucleus | 46.71 | 38.01 |
| Zm00001d042781_P001 | Maize | nucleus | 47.34 | 37.38 |
| TraesCS1A01G276800.1 | Wheat | nucleus, plastid | 43.89 | 36.94 |
| Zm00001d010131_P001 | Maize | nucleus, plastid | 45.45 | 36.8 |
| TraesCS3A01G371700.1 | Wheat | cytosol, plastid | 48.28 | 36.07 |
| KRH22822 | Soybean | plastid | 19.12 | 21.94 |
| KRG97571 | Soybean | nucleus, plastid | 22.26 | 21.01 |
| KRH43171 | Soybean | nucleus, plastid | 20.69 | 20.75 |
| KRH59322 | Soybean | nucleus | 20.69 | 20.18 |
| KRH31302 | Soybean | nucleus, plastid | 22.26 | 19.51 |
| KRH30553 | Soybean | nucleus, plastid | 22.26 | 17.32 |
| KRH25115 | Soybean | nucleus | 21.32 | 17.17 |
| KRH26538 | Soybean | nucleus, plastid | 21.63 | 16.83 |
| KRG91822 | Soybean | nucleus, plastid | 23.2 | 14.54 |
| KRH34957 | Soybean | nucleus, plastid | 22.88 | 14.4 |
| KRH08551 | Soybean | nucleus, plastid | 23.2 | 14.2 |
Protein Annotations
| EntrezGene:100800644 | MapMan:15.5.15 | Gene3D:3.30.160.60 | EMBL:ACUP02008425 | EnsemblPlantsGene:GLYMA_13G317200 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | UniProt:I1M4D8 | InterPro:IPR013087 | EnsemblPlants:KRH22690 | ProteinID:KRH22690 |
| ProteinID:KRH22690.1 | PFAM:PF13912 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF58 |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000233AABF | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg |
Description
hypothetical protein
Coordinates
chr13:+:41173745..41177372
Molecular Weight (calculated)
36530.2 Da
IEP (calculated)
8.076
GRAVY (calculated)
-0.860
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFRECNNVE NKNLCLQTPT FIEWLKPSSS SSQTSSISSS PPSYSLIQHE QLVQDQTIQF LPFKEDQHIG VQKEGLEVKE EKKVEQVTVA LHIGLPNTRG
101: HEPDDDHDAD EKKLFHVKEE EEPLKKSFQG NCSFNQERRF WIPTPAQILV GPMQFACSIC SKSFNRYNNM QMHMWGHGSE FRKGPESLKG TQPAAMLRLP
201: CYCCAQGCKN NINHPRAKPL KDFRTLQTHY KRKHGAKPFM CRKCSKSFAV KGDWRTHEKN CGKLWYCTCG SDFKHKRSLK DHIRSFGKGH SPHPSLEGFV
301: EDEKECVTGS DDEDDVAHA
101: HEPDDDHDAD EKKLFHVKEE EEPLKKSFQG NCSFNQERRF WIPTPAQILV GPMQFACSIC SKSFNRYNNM QMHMWGHGSE FRKGPESLKG TQPAAMLRLP
201: CYCCAQGCKN NINHPRAKPL KDFRTLQTHY KRKHGAKPFM CRKCSKSFAV KGDWRTHEKN CGKLWYCTCG SDFKHKRSLK DHIRSFGKGH SPHPSLEGFV
301: EDEKECVTGS DDEDDVAHA
001: MNSYETKGLS FESPSFIEWL KPQSSTTSSK SVLYRGKTRD AISRSNHHQS QMNMLERSLF LYQPQEPLNT SIQCLPLLNK LMENNSQASD IKEENKDDVV
101: TLQIGFPKYH RGSSEDGSDI TFDHQKKPIK REIIEDGVVM MKKRRKMKFD EEIIDSDVEV CGKRFWIPSP AQIHVGPMQF ACSICSKTFN RYNNMQMHMW
201: GHGSEFRKGA DSLKGTIQPA AILRLPCYCC AEGCKNNINH PRSKPLKDFR TLQTHYKRKH GSKPFSCGKC GKALAVKGDW RTHEKNCGKL WYCTCGSDFK
301: HKRSLKDHIR SFGSGHSPHP SLLFDGFEED TECVTTE
101: TLQIGFPKYH RGSSEDGSDI TFDHQKKPIK REIIEDGVVM MKKRRKMKFD EEIIDSDVEV CGKRFWIPSP AQIHVGPMQF ACSICSKTFN RYNNMQMHMW
201: GHGSEFRKGA DSLKGTIQPA AILRLPCYCC AEGCKNNINH PRSKPLKDFR TLQTHYKRKH GSKPFSCGKC GKALAVKGDW RTHEKNCGKL WYCTCGSDFK
301: HKRSLKDHIR SFGSGHSPHP SLLFDGFEED TECVTTE
Arabidopsis Description
WIP3Zinc finger protein WIP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.