Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH22690 | Soybean | nucleus | 94.7 | 95.3 |
| KRH25207 | Soybean | nucleus | 42.37 | 91.89 |
| KRH30442 | Soybean | nucleus | 78.5 | 76.36 |
| VIT_06s0080g00270.t01 | Wine grape | plastid | 73.21 | 67.72 |
| GSMUA_Achr5P26210_001 | Banana | nucleus | 50.47 | 58.06 |
| PGSC0003DMT400018308 | Potato | nucleus, plastid | 58.57 | 57.67 |
| KRH18924 | Soybean | nucleus | 41.12 | 55.7 |
| CDY06308 | Canola | nucleus | 57.63 | 54.9 |
| CDY22690 | Canola | nucleus | 57.01 | 54.3 |
| Bra031621.1-P | Field mustard | nucleus | 56.7 | 54.01 |
| KRH16750 | Soybean | nucleus | 41.74 | 53.82 |
| KRH34760 | Soybean | nucleus | 45.48 | 53.48 |
| CDX95075 | Canola | nucleus | 56.07 | 53.25 |
| Bra018638.1-P | Field mustard | nucleus | 55.76 | 53.12 |
| KRG92027 | Soybean | nucleus | 45.17 | 52.92 |
| CDX93575 | Canola | nucleus | 55.45 | 52.82 |
| AT1G08290.1 | Thale cress | nucleus | 54.52 | 51.93 |
| KRH25208 | Soybean | nucleus, plastid | 25.86 | 47.43 |
| KRH24697 | Soybean | nucleus, plastid | 47.98 | 45.16 |
| KRH29701 | Soybean | nucleus | 47.66 | 44.87 |
| KRH13927 | Soybean | nucleus, plastid | 47.35 | 44.44 |
| KRH43510 | Soybean | nucleus, plastid | 47.66 | 44.22 |
| KRH10191 | Soybean | nucleus, plastid | 47.35 | 44.06 |
| KRH27491 | Soybean | nucleus, plastid | 48.29 | 44.03 |
| KRH70598 | Soybean | nucleus | 45.48 | 43.71 |
| KRH75477 | Soybean | nucleus | 45.17 | 43.67 |
| KRH23146 | Soybean | nucleus, plastid | 47.35 | 43.43 |
| KRG95308 | Soybean | nucleus, plastid | 47.04 | 43.27 |
| Solyc06g074360.2.1 | Tomato | nucleus | 28.04 | 42.65 |
| KRH20837 | Soybean | nucleus, plastid | 47.35 | 42.58 |
| KRH66988 | Soybean | nucleus | 47.35 | 42.46 |
| KRH71956 | Soybean | nucleus, plastid | 48.29 | 41.78 |
| Os01t0859100-01 | Rice | nucleus, plastid | 48.91 | 41.76 |
| TraesCS3D01G364800.1 | Wheat | nucleus | 47.04 | 41.14 |
| TraesCS3B01G404000.1 | Wheat | nucleus | 47.04 | 40.59 |
| Os05t0444200-01 | Rice | plastid | 48.6 | 40.1 |
| KRH33045 | Soybean | nucleus, plastid | 47.66 | 39.64 |
| TraesCS1B01G285900.1 | Wheat | nucleus, plastid | 44.55 | 38.65 |
| TraesCS1D01G276200.1 | Wheat | nucleus, plastid | 43.93 | 38.42 |
| Zm00001d038297_P001 | Maize | nucleus | 46.73 | 38.27 |
| EES18308 | Sorghum | plastid | 47.98 | 38.21 |
| EES03920 | Sorghum | plastid | 47.35 | 37.72 |
| Zm00001d042781_P001 | Maize | nucleus | 46.42 | 36.88 |
| Zm00001d010131_P001 | Maize | nucleus, plastid | 45.17 | 36.8 |
| TraesCS1A01G276800.1 | Wheat | nucleus, plastid | 43.3 | 36.68 |
| TraesCS3A01G371700.1 | Wheat | cytosol, plastid | 46.73 | 35.13 |
| KRH22822 | Soybean | plastid | 19.0 | 21.94 |
| KRG97571 | Soybean | nucleus, plastid | 22.12 | 21.01 |
| KRH43171 | Soybean | nucleus, plastid | 20.56 | 20.75 |
| KRH59322 | Soybean | nucleus | 20.25 | 19.88 |
| KRH31302 | Soybean | nucleus, plastid | 22.12 | 19.51 |
| KRH30553 | Soybean | nucleus, plastid | 22.12 | 17.32 |
| KRH25115 | Soybean | nucleus | 21.18 | 17.17 |
| KRH26538 | Soybean | nucleus, plastid | 21.5 | 16.83 |
| KRG91822 | Soybean | nucleus, plastid | 23.05 | 14.54 |
| KRH34957 | Soybean | nucleus, plastid | 22.74 | 14.4 |
| KRH08551 | Soybean | nucleus, plastid | 23.05 | 14.2 |
Protein Annotations
| EntrezGene:100819306 | MapMan:15.5.15 | Gene3D:3.30.160.60 | EMBL:ACUP02007725 | EnsemblPlantsGene:GLYMA_12G183900 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | UniProt:I1LTU8 | InterPro:IPR013087 | EnsemblPlants:KRH26622 | ProteinID:KRH26622 |
| ProteinID:KRH26622.1 | PFAM:PF13912 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF58 |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000233C591 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg |
Description
hypothetical protein
Coordinates
chr12:-:34507210..34511576
Molecular Weight (calculated)
36737.3 Da
IEP (calculated)
7.819
GRAVY (calculated)
-0.871
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFRECNNVE NKNLCLQTPT FIEWLKPSSS SSLTSLISSS PPSYSLTQHE QLAQETIQFL PFKEDQHIRV QKEGFEVKEE KKVEQVTVAL HIGLPNTGGH
101: DPDDDNDHDA DDEKKVFHVK EEEEPLKKGF QGNCSFNQER RFWIPTPAQI LVGPMQFACS ICSKTFNRYN NMQMHMWGHG SEFRKGPDSL KGTQPAAMLR
201: LPCYCCAQGC KNNINHPRAK PLKDFRTLQT HYKRKHGAKP FMCRKCSKSF AVKGDWRTHE KNCGKLWYCT CGSDFKHKRS LKDHIRSFGK GHSPHPSLEG
301: FVEDEKECVT GSDDEDDVAH T
101: DPDDDNDHDA DDEKKVFHVK EEEEPLKKGF QGNCSFNQER RFWIPTPAQI LVGPMQFACS ICSKTFNRYN NMQMHMWGHG SEFRKGPDSL KGTQPAAMLR
201: LPCYCCAQGC KNNINHPRAK PLKDFRTLQT HYKRKHGAKP FMCRKCSKSF AVKGDWRTHE KNCGKLWYCT CGSDFKHKRS LKDHIRSFGK GHSPHPSLEG
301: FVEDEKECVT GSDDEDDVAH T
001: MNSYETKGLS FESPSFIEWL KPQSSTTSSK SVLYRGKTRD AISRSNHHQS QMNMLERSLF LYQPQEPLNT SIQCLPLLNK LMENNSQASD IKEENKDDVV
101: TLQIGFPKYH RGSSEDGSDI TFDHQKKPIK REIIEDGVVM MKKRRKMKFD EEIIDSDVEV CGKRFWIPSP AQIHVGPMQF ACSICSKTFN RYNNMQMHMW
201: GHGSEFRKGA DSLKGTIQPA AILRLPCYCC AEGCKNNINH PRSKPLKDFR TLQTHYKRKH GSKPFSCGKC GKALAVKGDW RTHEKNCGKL WYCTCGSDFK
301: HKRSLKDHIR SFGSGHSPHP SLLFDGFEED TECVTTE
101: TLQIGFPKYH RGSSEDGSDI TFDHQKKPIK REIIEDGVVM MKKRRKMKFD EEIIDSDVEV CGKRFWIPSP AQIHVGPMQF ACSICSKTFN RYNNMQMHMW
201: GHGSEFRKGA DSLKGTIQPA AILRLPCYCC AEGCKNNINH PRSKPLKDFR TLQTHYKRKH GSKPFSCGKC GKALAVKGDW RTHEKNCGKL WYCTCGSDFK
301: HKRSLKDHIR SFGSGHSPHP SLLFDGFEED TECVTTE
Arabidopsis Description
WIP3Zinc finger protein WIP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.