Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018638.1-P | Field mustard | nucleus | 99.11 | 99.11 |
| CDX95075 | Canola | nucleus | 97.92 | 97.63 |
| AT1G08290.1 | Thale cress | nucleus | 84.87 | 84.87 |
| KRH25207 | Soybean | nucleus | 34.72 | 79.05 |
| CDY22690 | Canola | nucleus | 59.94 | 59.94 |
| CDY06308 | Canola | nucleus | 59.35 | 59.35 |
| KRH26622 | Soybean | nucleus | 52.82 | 55.45 |
| CDY57608 | Canola | nucleus | 39.47 | 55.42 |
| KRH22690 | Soybean | nucleus | 52.23 | 55.17 |
| CDX67704 | Canola | nucleus | 40.06 | 54.88 |
| PGSC0003DMT400018308 | Potato | nucleus, plastid | 51.93 | 53.68 |
| KRH30442 | Soybean | nucleus | 51.93 | 53.03 |
| VIT_06s0080g00270.t01 | Wine grape | plastid | 53.71 | 52.16 |
| GSMUA_Achr5P26210_001 | Banana | nucleus | 41.54 | 50.18 |
| CDY12025 | Canola | nucleus | 40.06 | 47.04 |
| CDY03134 | Canola | nucleus | 39.76 | 46.69 |
| CDY06390 | Canola | nucleus | 43.92 | 44.31 |
| CDY19385 | Canola | nucleus | 39.76 | 44.08 |
| CDY29624 | Canola | nucleus | 43.92 | 43.53 |
| CDX97995 | Canola | nucleus | 39.76 | 43.51 |
| CDY22834 | Canola | nucleus, plastid | 43.32 | 43.2 |
| CDY25224 | Canola | nucleus | 43.03 | 42.9 |
| CDX88959 | Canola | nucleus | 46.29 | 42.86 |
| CDY35565 | Canola | nucleus | 43.03 | 42.77 |
| CDY26642 | Canola | nucleus | 37.39 | 42.57 |
| CDX72006 | Canola | nucleus | 46.59 | 42.09 |
| CDY06083 | Canola | nucleus | 46.29 | 41.71 |
| CDY27556 | Canola | nucleus | 44.21 | 41.62 |
| CDY57920 | Canola | nucleus | 44.21 | 41.5 |
| Solyc06g074360.2.1 | Tomato | nucleus | 25.82 | 41.23 |
| Os01t0859100-01 | Rice | nucleus, plastid | 43.92 | 39.36 |
| TraesCS3D01G364800.1 | Wheat | nucleus | 42.43 | 38.96 |
| TraesCS3B01G404000.1 | Wheat | nucleus | 42.73 | 38.71 |
| Os05t0444200-01 | Rice | plastid | 43.92 | 38.05 |
| EES18308 | Sorghum | plastid | 45.4 | 37.97 |
| Zm00001d010131_P001 | Maize | nucleus, plastid | 43.03 | 36.8 |
| EES03920 | Sorghum | plastid | 43.62 | 36.48 |
| Zm00001d042781_P001 | Maize | nucleus | 43.62 | 36.39 |
| TraesCS1D01G276200.1 | Wheat | nucleus, plastid | 39.47 | 36.24 |
| Zm00001d038297_P001 | Maize | nucleus | 42.14 | 36.22 |
| TraesCS1B01G285900.1 | Wheat | nucleus, plastid | 39.76 | 36.22 |
| KRH25208 | Soybean | nucleus, plastid | 18.1 | 34.86 |
| TraesCS1A01G276800.1 | Wheat | nucleus, plastid | 38.87 | 34.56 |
| TraesCS3A01G371700.1 | Wheat | cytosol, plastid | 42.43 | 33.49 |
| CDY09179 | Canola | nucleus | 19.88 | 20.68 |
| CDY26965 | Canola | nucleus | 20.77 | 19.13 |
| CDY69109 | Canola | nucleus | 20.77 | 18.82 |
| CDY26966 | Canola | nucleus | 20.77 | 18.62 |
| CDY31715 | Canola | nucleus | 20.47 | 18.35 |
| CDX98183 | Canola | nucleus | 20.47 | 18.35 |
| CDX74505 | Canola | nucleus | 20.47 | 18.35 |
| CDY03148 | Canola | nucleus | 23.44 | 18.33 |
| CDY09178 | Canola | nucleus | 19.88 | 18.16 |
| CDY12041 | Canola | nucleus | 21.96 | 18.09 |
| CDY46467 | Canola | nucleus | 23.15 | 15.98 |
| CDX91774 | Canola | nucleus | 23.15 | 15.73 |
Protein Annotations
| EnsemblPlants:CDX93575 | EnsemblPlantsGene:GSBRNA2T00156255001 | Gene3D:3.30.160.60 | GO:A0A078DW83 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | ncoils:Coil | PANTHER:PTHR10593 |
| PANTHER:PTHR10593:SF58 | PFscan:PS50157 | ProteinID:CDX93575 | ProteinID:CDX93575.1 | ScanProsite:PS00028 | SEG:seg |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0004EE8AC9 | MapMan:15.5.15 | : | : |
Description
BnaA06g04730D
Coordinates
chrLK031876:+:783243..785333
Molecular Weight (calculated)
38402.8 Da
IEP (calculated)
8.332
GRAVY (calculated)
-0.712
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLRNLHEMG LGFESPSFIE WLKAPSPSSS SLLFRIKTKD VISRSNHQSM LERSLFSYQP QEPLNTSIRC LPLLNKLMEN ESQALDDIKE EKDDDDVVTL
101: QIGLPNYRRG SSVEDDSDTT SDHHQKSPIK REIIDDGVVM IKKRRKMIID EEMNDLDMEV CGKRFWIPSP AQIHVGPMQF ACTICSKTFN RYNNMQMHMW
201: GHGSEFRKGA DSLKGTTQPA AILRLPCYCC AEGCKNNINH PRAKPLKDFR TLQTHYKRKH GSKPFSCGKC GKALAVKGDW RTHEKNCGKL WYCTCGSDFK
301: HKRSLKDHIK SFGNGHSPHP SLSFGGFEED TECVTTE
101: QIGLPNYRRG SSVEDDSDTT SDHHQKSPIK REIIDDGVVM IKKRRKMIID EEMNDLDMEV CGKRFWIPSP AQIHVGPMQF ACTICSKTFN RYNNMQMHMW
201: GHGSEFRKGA DSLKGTTQPA AILRLPCYCC AEGCKNNINH PRAKPLKDFR TLQTHYKRKH GSKPFSCGKC GKALAVKGDW RTHEKNCGKL WYCTCGSDFK
301: HKRSLKDHIK SFGNGHSPHP SLSFGGFEED TECVTTE
001: MNSYETKGLS FESPSFIEWL KPQSSTTSSK SVLYRGKTRD AISRSNHHQS QMNMLERSLF LYQPQEPLNT SIQCLPLLNK LMENNSQASD IKEENKDDVV
101: TLQIGFPKYH RGSSEDGSDI TFDHQKKPIK REIIEDGVVM MKKRRKMKFD EEIIDSDVEV CGKRFWIPSP AQIHVGPMQF ACSICSKTFN RYNNMQMHMW
201: GHGSEFRKGA DSLKGTIQPA AILRLPCYCC AEGCKNNINH PRSKPLKDFR TLQTHYKRKH GSKPFSCGKC GKALAVKGDW RTHEKNCGKL WYCTCGSDFK
301: HKRSLKDHIR SFGSGHSPHP SLLFDGFEED TECVTTE
101: TLQIGFPKYH RGSSEDGSDI TFDHQKKPIK REIIEDGVVM MKKRRKMKFD EEIIDSDVEV CGKRFWIPSP AQIHVGPMQF ACSICSKTFN RYNNMQMHMW
201: GHGSEFRKGA DSLKGTIQPA AILRLPCYCC AEGCKNNINH PRSKPLKDFR TLQTHYKRKH GSKPFSCGKC GKALAVKGDW RTHEKNCGKL WYCTCGSDFK
301: HKRSLKDHIR SFGSGHSPHP SLLFDGFEED TECVTTE
Arabidopsis Description
WIP3Zinc finger protein WIP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.