Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014612.1-P | Field mustard | nucleus, plastid | 99.73 | 99.73 |
| CDX67704 | Canola | nucleus | 59.34 | 87.8 |
| CDY57608 | Canola | nucleus | 57.42 | 87.08 |
| CDY06083 | Canola | nucleus | 87.91 | 85.56 |
| CDX72006 | Canola | nucleus | 87.64 | 85.52 |
| VIT_08s0007g08070.t01 | Wine grape | nucleus | 62.91 | 66.38 |
| GSMUA_AchrUn_... | Banana | nucleus | 54.67 | 60.86 |
| KRH71956 | Soybean | nucleus, plastid | 60.44 | 59.3 |
| CDY06390 | Canola | nucleus | 53.3 | 58.08 |
| CDY22834 | Canola | nucleus, plastid | 53.3 | 57.4 |
| CDY29624 | Canola | nucleus | 53.57 | 57.35 |
| CDY25224 | Canola | nucleus | 53.02 | 57.1 |
| CDY35565 | Canola | nucleus | 53.02 | 56.93 |
| KRH33045 | Soybean | nucleus, plastid | 59.89 | 56.48 |
| TraesCS7A01G404400.1 | Wheat | nucleus | 56.59 | 55.98 |
| TraesCS7B01G304000.1 | Wheat | nucleus | 56.59 | 55.68 |
| TraesCS7D01G397800.1 | Wheat | nucleus | 56.04 | 55.14 |
| CDY57920 | Canola | nucleus | 53.85 | 54.6 |
| CDY27556 | Canola | nucleus | 53.57 | 54.47 |
| GSMUA_Achr1P16530_001 | Banana | nucleus | 52.47 | 52.91 |
| EER88644 | Sorghum | nucleus, plastid | 58.52 | 52.72 |
| Zm00001d036812_P001 | Maize | nucleus | 56.32 | 52.7 |
| Zm00001d046774_P001 | Maize | nucleus | 56.87 | 52.01 |
| CDY19385 | Canola | nucleus | 43.13 | 51.64 |
| CDX97995 | Canola | nucleus | 43.41 | 51.3 |
| CDY12025 | Canola | nucleus | 39.56 | 50.17 |
| CDY03134 | Canola | nucleus | 38.46 | 48.78 |
| CDY26642 | Canola | nucleus | 37.91 | 46.62 |
| Os06t0612300-01 | Rice | endoplasmic reticulum, vacuole | 56.87 | 46.52 |
| CDX93575 | Canola | nucleus | 42.86 | 46.29 |
| CDX95075 | Canola | nucleus | 42.86 | 46.15 |
| CDY22690 | Canola | nucleus | 39.29 | 42.43 |
| CDY06308 | Canola | nucleus | 38.74 | 41.84 |
| CDY09179 | Canola | nucleus | 19.51 | 21.91 |
| CDY09178 | Canola | nucleus | 20.6 | 20.33 |
| CDY26965 | Canola | nucleus | 20.33 | 20.22 |
| CDY26966 | Canola | nucleus | 20.88 | 20.21 |
| CDX98183 | Canola | nucleus | 20.6 | 19.95 |
| CDY31715 | Canola | nucleus | 20.6 | 19.95 |
| CDX74505 | Canola | nucleus | 20.6 | 19.95 |
| CDY69109 | Canola | nucleus | 20.33 | 19.89 |
| CDY12041 | Canola | nucleus | 20.88 | 18.58 |
| CDY03148 | Canola | nucleus | 20.6 | 17.4 |
| CDY46467 | Canola | nucleus | 20.33 | 15.16 |
| CDX91774 | Canola | nucleus | 20.33 | 14.92 |
Protein Annotations
| EnsemblPlants:CDX88959 | EnsemblPlantsGene:GSBRNA2T00149063001 | Gene3D:3.30.160.60 | GO:A0A078DJX6 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF98 |
| PFscan:PS50157 | ProteinID:CDX88959 | ProteinID:CDX88959.1 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI0004EDEC52 | MapMan:15.5.15 | : | : | : |
Description
BnaA04g02270D
Coordinates
chrLK031857:+:163123..165173
Molecular Weight (calculated)
41088.9 Da
IEP (calculated)
7.643
GRAVY (calculated)
-0.934
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MADPYSNFFT GWFKPNPFHN YLNSSSNPSS PLPPPSSFFL IPHPGDLRRP PPTTPPSPPP REALPLLSLS PANKQQNHHD LIQEPPSTSM DVDYGHHHHQ
101: VDHNLDKDDH DVTVALSIGL PSPSTRDMAS LFMMSSSSSS SRTTNHHENI NDKKDPHNDY HHGSAGGGED DDEDSAGGCR ISRLNKYQYW IPTPSQILIG
201: PTQFSCPVCF KTFNRYNNMQ MHMWGHGSQY RKGPESLRGT QPTGMLRLPC YCCSPGCRNN IDHPRAKPLK DFRTLQTHYK RKHGIKPFMC RKCGKAFAVR
301: GDWRTHEKNC GKLWYCICGS DFKHKRSLKD HIKAFGNGHG AYGIDGFDEE DEPASEVEQL DNDQ
101: VDHNLDKDDH DVTVALSIGL PSPSTRDMAS LFMMSSSSSS SRTTNHHENI NDKKDPHNDY HHGSAGGGED DDEDSAGGCR ISRLNKYQYW IPTPSQILIG
201: PTQFSCPVCF KTFNRYNNMQ MHMWGHGSQY RKGPESLRGT QPTGMLRLPC YCCSPGCRNN IDHPRAKPLK DFRTLQTHYK RKHGIKPFMC RKCGKAFAVR
301: GDWRTHEKNC GKLWYCICGS DFKHKRSLKD HIKAFGNGHG AYGIDGFDEE DEPASEVEQL DNDQ
001: MTDPYSNFFT DWFKSNPFHH YPNSSTNPSP HPLPPVTPPS SFFFFPQSGD LRRPPPPPTP PPSPPLREAL PLLSLSPANK QQDHHHNHDH LIQEPPSTSM
101: DVDYDHHHQD DHHNLDDDDH DVTVALHIGL PSPSAQEMAS LLMMSSSSSS SRTTHHHEDM NHKKDLDHEY SHGAVGGGED DDEDSVGGDG GCRISRLNKG
201: QYWIPTPSQI LIGPTQFSCP VCFKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTGMLR LPCYCCAPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGIKP
301: FMCRKCGKAF AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHGAYGIDGF DEEDEPASEV EQLDNDHESM QSK
101: DVDYDHHHQD DHHNLDDDDH DVTVALHIGL PSPSAQEMAS LLMMSSSSSS SRTTHHHEDM NHKKDLDHEY SHGAVGGGED DDEDSVGGDG GCRISRLNKG
201: QYWIPTPSQI LIGPTQFSCP VCFKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTGMLR LPCYCCAPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGIKP
301: FMCRKCGKAF AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHGAYGIDGF DEEDEPASEV EQLDNDHESM QSK
Arabidopsis Description
WIP2WIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VLW5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.