Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030450.1-P | Field mustard | nucleus | 99.41 | 99.41 |
| CDY35565 | Canola | nucleus | 95.29 | 95.58 |
| CDY22834 | Canola | nucleus, plastid | 88.24 | 88.76 |
| CDY25224 | Canola | nucleus | 86.76 | 87.28 |
| AT1G51220.1 | Thale cress | nucleus | 84.71 | 85.46 |
| CDY06390 | Canola | nucleus | 68.82 | 70.06 |
| CDY27556 | Canola | nucleus | 72.35 | 68.72 |
| CDY57920 | Canola | nucleus | 72.06 | 68.25 |
| CDY57608 | Canola | nucleus | 46.47 | 65.83 |
| CDX67704 | Canola | nucleus | 47.06 | 65.04 |
| Solyc11g062060.1.1 | Tomato | nucleus | 48.24 | 62.84 |
| GSMUA_Achr9P12600_001 | Banana | nucleus | 54.12 | 59.16 |
| GSMUA_Achr3P03850_001 | Banana | plastid | 52.94 | 55.73 |
| VIT_06s0004g01870.t01 | Wine grape | nucleus | 54.71 | 55.69 |
| GSMUA_Achr6P03470_001 | Banana | nucleus | 51.18 | 54.55 |
| GSMUA_Achr4P01560_001 | Banana | nucleus | 51.47 | 54.35 |
| GSMUA_Achr8P25650_001 | Banana | nucleus, plastid | 47.94 | 54.33 |
| GSMUA_AchrUn_... | Banana | plastid | 52.06 | 54.13 |
| KRH10191 | Soybean | nucleus, plastid | 54.71 | 53.91 |
| PGSC0003DMT400035408 | Potato | nucleus | 55.0 | 53.89 |
| CDX72006 | Canola | nucleus | 59.12 | 53.89 |
| CDX88959 | Canola | nucleus | 57.35 | 53.57 |
| CDY06083 | Canola | nucleus | 58.53 | 53.21 |
| GSMUA_AchrUn_... | Banana | nucleus | 53.24 | 52.62 |
| KRH23146 | Soybean | nucleus, plastid | 53.24 | 51.71 |
| GSMUA_Achr3P11050_001 | Banana | cytosol, nucleus, plastid | 50.59 | 50.44 |
| KRH29701 | Soybean | nucleus | 50.29 | 50.15 |
| KRH24697 | Soybean | nucleus, plastid | 50.29 | 50.15 |
| CDY03134 | Canola | nucleus | 41.47 | 49.13 |
| CDY12025 | Canola | nucleus | 41.18 | 48.78 |
| TraesCS7D01G397800.1 | Wheat | nucleus | 52.06 | 47.84 |
| TraesCS7A01G404400.1 | Wheat | nucleus | 51.76 | 47.83 |
| CDX97995 | Canola | nucleus | 43.24 | 47.73 |
| CDY19385 | Canola | nucleus | 42.65 | 47.7 |
| TraesCS7B01G304000.1 | Wheat | nucleus | 51.76 | 47.57 |
| Zm00001d036812_P001 | Maize | nucleus | 51.47 | 44.99 |
| CDY26642 | Canola | nucleus | 38.53 | 44.26 |
| Zm00001d046774_P001 | Maize | nucleus | 51.47 | 43.97 |
| CDX93575 | Canola | nucleus | 43.53 | 43.92 |
| CDX95075 | Canola | nucleus | 43.53 | 43.79 |
| EER88644 | Sorghum | nucleus, plastid | 51.76 | 43.56 |
| CDY22690 | Canola | nucleus | 42.06 | 42.43 |
| CDY06308 | Canola | nucleus | 41.76 | 42.14 |
| Os06t0612300-01 | Rice | endoplasmic reticulum, vacuole | 52.94 | 40.45 |
| CDY09179 | Canola | nucleus | 20.29 | 21.3 |
| CDY12041 | Canola | nucleus | 23.82 | 19.8 |
| CDY26965 | Canola | nucleus | 20.88 | 19.4 |
| CDY69109 | Canola | nucleus | 21.18 | 19.35 |
| CDY26966 | Canola | nucleus | 21.18 | 19.15 |
| CDX98183 | Canola | nucleus | 20.88 | 18.88 |
| CDY31715 | Canola | nucleus | 20.88 | 18.88 |
| CDX74505 | Canola | nucleus | 20.88 | 18.88 |
| CDY09178 | Canola | nucleus | 20.29 | 18.7 |
| CDY03148 | Canola | nucleus | 22.94 | 18.1 |
| CDY46467 | Canola | nucleus | 23.24 | 16.19 |
| CDX91774 | Canola | nucleus | 23.24 | 15.93 |
Protein Annotations
| MapMan:15.5.15 | GO:A0A078GWV8 | UniProt:A0A078GWV8 | EnsemblPlants:CDY29624 | ProteinID:CDY29624 | ProteinID:CDY29624.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00043370001 | InterPro:IPR013087 | ScanProsite:PS00028 |
| PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF61 | SUPFAM:SSF57667 | UniParc:UPI0004EEBC29 | InterPro:Znf_C2H2_sf |
| InterPro:Znf_C2H2_type | SEG:seg | : | : | : | : |
Description
BnaA05g15460DBnaA05g15460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GWV8]
Coordinates
chrLK032240:-:428740..430573
Molecular Weight (calculated)
38666.5 Da
IEP (calculated)
6.572
GRAVY (calculated)
-0.929
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNPACSNLF NNGFDNTNFN YSTSLSYIYN SQNSFYHPDT TNPNYMSPTT TTSTFPNSPP LREALPLLSL SPIRHQEQHG QPCFLNTDNT TSSNFHDVTV
101: DLHLGLPNYG DGGSYIAPEA TTEEQDQDHD QEVEVTVESH LHDDDDHHED LYRGHHYWIP TPAQILIGPT QFSCPLCFKT FNRYNNMQMH MWGHGSQYRK
201: GPESLRGTQP TGMLRLPCFC CAPGCKNNID HPRAKPLKDF RTLQTHYKRK HGSRPFACRR CGKAFAVKGD WRTHEKNCGK LWYCSCGSDF KHKRSLKDHV
301: KAFGNGHVPC GIDSFGGDHE DYYEAASDNE QQDDCNNNEC
101: DLHLGLPNYG DGGSYIAPEA TTEEQDQDHD QEVEVTVESH LHDDDDHHED LYRGHHYWIP TPAQILIGPT QFSCPLCFKT FNRYNNMQMH MWGHGSQYRK
201: GPESLRGTQP TGMLRLPCFC CAPGCKNNID HPRAKPLKDF RTLQTHYKRK HGSRPFACRR CGKAFAVKGD WRTHEKNCGK LWYCSCGSDF KHKRSLKDHV
301: KAFGNGHVPC GIDSFGGDHE DYYEAASDNE QQDDCNNNEC
001: MSNPACSNLF NNGCDHNSFN YSTSLSYIYN SHGSYYYSNT TNPNYINHTH TTSTSPNSPP LREALPLLSL SPIRHQEQQD QHYFMDTHQI SSSNFLDDPL
101: VTVDLHLGLP NYGVGESIRS NIAPDATTDE QDQDHDRGVE VTVESHLDDD DDHHGDLHRG HHYWIPTPSQ ILIGPTQFTC PLCFKTFNRY NNMQMHMWGH
201: GSQYRKGPES LRGTQPTGML RLPCFCCAPG CKNNIDHPRA KPLKDFRTLQ THYKRKHGSK PFACRMCGKA FAVKGDWRTH EKNCGKLWYC SCGSDFKHKR
301: SLKDHVKAFG NGHVPCGIDS FGGDHEDYYD AASDIEQ
101: VTVDLHLGLP NYGVGESIRS NIAPDATTDE QDQDHDRGVE VTVESHLDDD DDHHGDLHRG HHYWIPTPSQ ILIGPTQFTC PLCFKTFNRY NNMQMHMWGH
201: GSQYRKGPES LRGTQPTGML RLPCFCCAPG CKNNIDHPRA KPLKDFRTLQ THYKRKHGSK PFACRMCGKA FAVKGDWRTH EKNCGKLWYC SCGSDFKHKR
301: SLKDHVKAFG NGHVPCGIDS FGGDHEDYYD AASDIEQ
Arabidopsis Description
WIP5Zinc finger protein WIP5 [Source:UniProtKB/Swiss-Prot;Acc:Q8W031]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.