Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P03850_001 | Banana | plastid | 67.28 | 68.11 |
| Solyc11g062060.1.1 | Tomato | nucleus | 53.21 | 66.67 |
| GSMUA_Achr8P25650_001 | Banana | nucleus, plastid | 60.86 | 66.33 |
| GSMUA_Achr9P12600_001 | Banana | nucleus | 62.69 | 65.92 |
| GSMUA_Achr4P01560_001 | Banana | nucleus | 62.69 | 63.66 |
| GSMUA_Achr6P03470_001 | Banana | nucleus | 61.77 | 63.32 |
| GSMUA_AchrUn_... | Banana | nucleus | 63.3 | 63.3 |
| GSMUA_Achr3P11050_001 | Banana | cytosol, nucleus, plastid | 65.44 | 62.76 |
| GSMUA_Achr3P11870_001 | Banana | nucleus | 65.14 | 62.65 |
| GSMUA_AchrUn_... | Banana | nucleus | 65.44 | 62.21 |
| VIT_06s0004g01870.t01 | Wine grape | nucleus | 62.69 | 61.38 |
| GSMUA_Achr4P06350_001 | Banana | nucleus | 56.88 | 60.0 |
| GSMUA_Achr9P22340_001 | Banana | nucleus | 64.53 | 57.81 |
| PGSC0003DMT400035408 | Potato | nucleus | 60.86 | 57.35 |
| KRH10191 | Soybean | nucleus, plastid | 60.24 | 57.1 |
| KRH23146 | Soybean | nucleus, plastid | 59.94 | 56.0 |
| GSMUA_Achr11P... | Banana | nucleus | 38.23 | 55.8 |
| KRH29701 | Soybean | nucleus | 57.19 | 54.84 |
| KRH24697 | Soybean | nucleus, plastid | 56.88 | 54.55 |
| GSMUA_Achr1P16530_001 | Banana | nucleus | 59.63 | 54.02 |
| AT1G51220.1 | Thale cress | nucleus | 55.05 | 53.41 |
| CDY22834 | Canola | nucleus, plastid | 54.43 | 52.66 |
| CDY25224 | Canola | nucleus | 54.13 | 52.37 |
| Bra030450.1-P | Field mustard | nucleus | 54.43 | 52.35 |
| Bra018902.1-P | Field mustard | plastid | 53.82 | 52.23 |
| CDY35565 | Canola | nucleus | 54.13 | 52.21 |
| CDY29624 | Canola | nucleus | 54.13 | 52.06 |
| CDY06390 | Canola | nucleus | 52.6 | 51.5 |
| GSMUA_Achr6P21380_001 | Banana | nucleus | 37.31 | 51.48 |
| GSMUA_Achr5P26210_001 | Banana | nucleus | 43.73 | 51.25 |
| Bra023918.1-P | Field mustard | nucleus | 54.13 | 49.3 |
| CDY57920 | Canola | nucleus | 54.13 | 49.3 |
| CDY27556 | Canola | nucleus | 53.82 | 49.16 |
| Bra031239.1-P | Field mustard | nucleus | 52.91 | 48.19 |
| GSMUA_Achr6P01410_001 | Banana | nucleus | 39.14 | 45.55 |
| AT3G20880.1 | Thale cress | nucleus | 54.13 | 42.96 |
| GSMUA_Achr5P09960_001 | Banana | endoplasmic reticulum, nucleus, plastid | 41.9 | 31.79 |
| GSMUA_Achr1P15330_001 | Banana | cytosol | 19.88 | 23.13 |
| GSMUA_Achr11P... | Banana | nucleus | 20.49 | 19.71 |
| GSMUA_Achr10P... | Banana | nucleus | 22.32 | 18.34 |
| GSMUA_Achr10P... | Banana | nucleus | 19.57 | 18.23 |
| GSMUA_Achr5P01170_001 | Banana | nucleus | 20.8 | 17.3 |
| GSMUA_Achr6P18840_001 | Banana | nucleus | 20.49 | 16.22 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP22660_001 | EnsemblPlants:GSMUA_AchrUn_randomT22660_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG22660_001 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | ncoils:Coil | PANTHER:PTHR10593 |
| PANTHER:PTHR10593:SF98 | PFAM:PF13912 | PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI0002948713 | UniProt:M0UBH4 | MapMan:15.5.15 | : | : |
Description
ZOS6-05 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG22660_001]
Coordinates
chrchrUn_random:+:111247542..111249404
Molecular Weight (calculated)
36984.6 Da
IEP (calculated)
7.419
GRAVY (calculated)
-0.780
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MADPYANSLQ GFFNCHPFTS HPSFSALPLP RHNILTNFTN YATSHLPSPL PPPPPASPPL REALPLLNLA PTPHHHQEEE EASCSFLEED AETATDEKKK
101: VSQDDGENEE DAVTVALHIG LPKDRDHDLG DDVPLGYPAI GRLRRGQYWI PTPSQILIGP TQFPCPVCSK TFNRYNNMQM HMWGHGSQYR KGPESLRGIQ
201: PTAMLRLPCY CCAPGCRNNI DHPRSKPLKD FRTLQTHYKR KHGIKPFMCR KCGKAFAVRG DWRTHEKNCG KLWYCTCGSD FKHKRSLKDH IKAFGSGHSA
301: YGIDCLEEDD ELSSEIEQDS NHRHQLP
101: VSQDDGENEE DAVTVALHIG LPKDRDHDLG DDVPLGYPAI GRLRRGQYWI PTPSQILIGP TQFPCPVCSK TFNRYNNMQM HMWGHGSQYR KGPESLRGIQ
201: PTAMLRLPCY CCAPGCRNNI DHPRSKPLKD FRTLQTHYKR KHGIKPFMCR KCGKAFAVRG DWRTHEKNCG KLWYCTCGSD FKHKRSLKDH IKAFGSGHSA
301: YGIDCLEEDD ELSSEIEQDS NHRHQLP
001: MTDPYSNFFT DWFKSNPFHH YPNSSTNPSP HPLPPVTPPS SFFFFPQSGD LRRPPPPPTP PPSPPLREAL PLLSLSPANK QQDHHHNHDH LIQEPPSTSM
101: DVDYDHHHQD DHHNLDDDDH DVTVALHIGL PSPSAQEMAS LLMMSSSSSS SRTTHHHEDM NHKKDLDHEY SHGAVGGGED DDEDSVGGDG GCRISRLNKG
201: QYWIPTPSQI LIGPTQFSCP VCFKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTGMLR LPCYCCAPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGIKP
301: FMCRKCGKAF AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHGAYGIDGF DEEDEPASEV EQLDNDHESM QSK
101: DVDYDHHHQD DHHNLDDDDH DVTVALHIGL PSPSAQEMAS LLMMSSSSSS SRTTHHHEDM NHKKDLDHEY SHGAVGGGED DDEDSVGGDG GCRISRLNKG
201: QYWIPTPSQI LIGPTQFSCP VCFKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTGMLR LPCYCCAPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGIKP
301: FMCRKCGKAF AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHGAYGIDGF DEEDEPASEV EQLDNDHESM QSK
Arabidopsis Description
WIP2WIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VLW5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.