Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- endoplasmic reticulum 1
- mitochondrion 1
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P21380_001 | Banana | nucleus | 44.55 | 81.01 |
| GSMUA_Achr6P01410_001 | Banana | nucleus | 51.74 | 79.36 |
| PGSC0003DMT400096573 | Potato | cytosol, mitochondrion, nucleus, peroxisome | 25.06 | 70.59 |
| VIT_01s0011g03100.t01 | Wine grape | nucleus | 38.28 | 60.0 |
| TraesCS5B01G177600.1 | Wheat | nucleus, plastid | 42.69 | 58.23 |
| KRH34760 | Soybean | nucleus | 35.96 | 56.78 |
| GSMUA_Achr11P... | Banana | nucleus | 29.23 | 56.25 |
| KRG92027 | Soybean | nucleus | 35.27 | 55.47 |
| TraesCS5D01G184400.1 | Wheat | nucleus | 45.48 | 55.21 |
| TraesCS5A01G179800.1 | Wheat | nucleus | 45.24 | 54.93 |
| Solyc05g009770.1.1 | Tomato | nucleus | 35.5 | 53.5 |
| AT1G13290.1 | Thale cress | nucleus | 36.66 | 52.32 |
| EER96535 | Sorghum | nucleus | 44.55 | 51.89 |
| Zm00001d005566_P001 | Maize | nucleus | 45.24 | 51.45 |
| Zm00001d020037_P001 | Maize | nucleus | 44.78 | 51.33 |
| KRH75477 | Soybean | nucleus | 39.44 | 51.2 |
| KRH70598 | Soybean | nucleus | 39.21 | 50.6 |
| Bra019822.1-P | Field mustard | nucleus | 35.73 | 50.0 |
| CDX97995 | Canola | nucleus | 35.73 | 50.0 |
| CDY19385 | Canola | nucleus | 35.27 | 50.0 |
| Os09t0307400-00 | Rice | nucleus | 45.01 | 49.24 |
| CDY26642 | Canola | nucleus | 32.25 | 46.96 |
| GSMUA_Achr5P26210_001 | Banana | nucleus | 30.39 | 46.95 |
| GSMUA_Achr8P25650_001 | Banana | nucleus, plastid | 30.39 | 43.67 |
| GSMUA_Achr6P03470_001 | Banana | nucleus | 32.02 | 43.26 |
| GSMUA_Achr9P12600_001 | Banana | nucleus | 31.09 | 43.09 |
| GSMUA_Achr4P01560_001 | Banana | nucleus | 32.02 | 42.86 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.02 | 42.2 |
| GSMUA_Achr3P03850_001 | Banana | plastid | 31.55 | 42.11 |
| GSMUA_AchrUn_... | Banana | plastid | 31.79 | 41.9 |
| GSMUA_Achr3P11050_001 | Banana | cytosol, nucleus, plastid | 32.48 | 41.06 |
| GSMUA_Achr3P11870_001 | Banana | nucleus | 32.02 | 40.59 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.55 | 39.53 |
| GSMUA_Achr1P16530_001 | Banana | nucleus | 31.55 | 37.67 |
| GSMUA_Achr4P06350_001 | Banana | nucleus | 26.68 | 37.1 |
| GSMUA_Achr9P22340_001 | Banana | nucleus | 30.39 | 35.89 |
| GSMUA_Achr1P15330_001 | Banana | cytosol | 14.15 | 21.71 |
| GSMUA_Achr11P... | Banana | nucleus | 15.31 | 19.41 |
| GSMUA_Achr10P... | Banana | nucleus | 15.55 | 16.83 |
| GSMUA_Achr5P01170_001 | Banana | nucleus | 15.31 | 16.79 |
| GSMUA_Achr10P... | Banana | nucleus | 13.23 | 16.24 |
| GSMUA_Achr6P18840_001 | Banana | nucleus | 15.55 | 16.22 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P09960_001 | EnsemblPlants:GSMUA_Achr5T09960_001 | EnsemblPlantsGene:GSMUA_Achr5G09960_001 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF52 | PFscan:PS50157 |
| SEG:seg | SUPFAM:SSF57667 | UniParc:UPI0002965EFF | UniProt:M0SX75 | MapMan:15.5.15 | : |
Description
ZOS9-04 - C2H2 zinc finger protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G09960_001]
Coordinates
chr5:-:7133144..7134540
Molecular Weight (calculated)
47354.8 Da
IEP (calculated)
7.685
GRAVY (calculated)
-0.529
Length
431 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPQKETEKD VREGAEKLGY RAANPSPNPT SVSVCVCILG VLWSLPRCWS HPPLPSSPPL PALCLPSNLT QPNLLHSHPL ARALSLNHSL PTHSLAPSPS
101: PPLLRTHIYL FPPPYSHPLL LLYPVGMFSN GGSSLPSKTS DQEEDHSILL LSLWPPGSHA TPSPCSSPAS SSSTYAPPIA PNWFHKQHHY FSHSSNQVED
201: DSAVTIALSI GPPPGATSAC ASTIAMPTTV TGLNPVPSQY WIPSAAEILI GNTQFSCTVC NKTFNRFNNM QQMHMWGHGS QYRRGSESLR GATRQMPSPS
301: LLKLPCYCCA EGCKNNIDHP RSRPLKDFRT LQTHYKRKHG ARSFACRRCG KAFAVRGDWR THEKNCGKLW FCICGSDFKH KRSLKDHVRS FGSGHAPHIV
401: ETMSFDEEEE EEEEEGDDGD EEGNGDNGGA L
101: PPLLRTHIYL FPPPYSHPLL LLYPVGMFSN GGSSLPSKTS DQEEDHSILL LSLWPPGSHA TPSPCSSPAS SSSTYAPPIA PNWFHKQHHY FSHSSNQVED
201: DSAVTIALSI GPPPGATSAC ASTIAMPTTV TGLNPVPSQY WIPSAAEILI GNTQFSCTVC NKTFNRFNNM QQMHMWGHGS QYRRGSESLR GATRQMPSPS
301: LLKLPCYCCA EGCKNNIDHP RSRPLKDFRT LQTHYKRKHG ARSFACRRCG KAFAVRGDWR THEKNCGKLW FCICGSDFKH KRSLKDHVRS FGSGHAPHIV
401: ETMSFDEEEE EEEEEGDDGD EEGNGDNGGA L
001: MNSYETKGLS FESPSFIEWL KPQSSTTSSK SVLYRGKTRD AISRSNHHQS QMNMLERSLF LYQPQEPLNT SIQCLPLLNK LMENNSQASD IKEENKDDVV
101: TLQIGFPKYH RGSSEDGSDI TFDHQKKPIK REIIEDGVVM MKKRRKMKFD EEIIDSDVEV CGKRFWIPSP AQIHVGPMQF ACSICSKTFN RYNNMQMHMW
201: GHGSEFRKGA DSLKGTIQPA AILRLPCYCC AEGCKNNINH PRSKPLKDFR TLQTHYKRKH GSKPFSCGKC GKALAVKGDW RTHEKNCGKL WYCTCGSDFK
301: HKRSLKDHIR SFGSGHSPHP SLLFDGFEED TECVTTE
101: TLQIGFPKYH RGSSEDGSDI TFDHQKKPIK REIIEDGVVM MKKRRKMKFD EEIIDSDVEV CGKRFWIPSP AQIHVGPMQF ACSICSKTFN RYNNMQMHMW
201: GHGSEFRKGA DSLKGTIQPA AILRLPCYCC AEGCKNNINH PRSKPLKDFR TLQTHYKRKH GSKPFSCGKC GKALAVKGDW RTHEKNCGKL WYCTCGSDFK
301: HKRSLKDHIR SFGSGHSPHP SLLFDGFEED TECVTTE
Arabidopsis Description
WIP3Zinc finger protein WIP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.