Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P15330_001 | Banana | cytosol | 46.47 | 56.23 |
| KRH22822 | Soybean | plastid | 38.24 | 46.76 |
| PGSC0003DMT400001105 | Potato | nucleus | 43.24 | 46.23 |
| TraesCS1A01G060200.1 | Wheat | nucleus | 49.71 | 44.01 |
| TraesCS1D01G061200.1 | Wheat | nucleus | 50.0 | 43.93 |
| CDY09179 | Canola | nucleus | 41.47 | 43.52 |
| TraesCS1B01G078700.1 | Wheat | nucleus | 49.71 | 43.11 |
| Os08t0562300-01 | Rice | nucleus | 48.53 | 42.86 |
| Os04t0165200-01 | Rice | nucleus | 45.88 | 42.05 |
| VIT_06s0061g00780.t01 | Wine grape | nucleus | 47.94 | 41.79 |
| Solyc11g066420.1.1 | Tomato | nucleus, plastid | 46.47 | 41.15 |
| AT5G22890.1 | Thale cress | nucleus | 44.71 | 40.75 |
| Zm00001d031895_P001 | Maize | nucleus | 49.12 | 39.86 |
| OQU80698 | Sorghum | nucleus | 49.41 | 39.53 |
| KRH26538 | Soybean | nucleus, plastid | 47.65 | 39.51 |
| KRH25115 | Soybean | nucleus | 45.88 | 39.39 |
| CDY09178 | Canola | nucleus | 42.06 | 38.75 |
| CDY31715 | Canola | nucleus | 42.35 | 38.3 |
| CDY26966 | Canola | nucleus | 42.35 | 38.3 |
| CDX98183 | Canola | nucleus | 42.35 | 38.3 |
| CDX74505 | Canola | nucleus | 42.35 | 38.3 |
| Bra002438.1-P | Field mustard | nucleus | 42.35 | 38.3 |
| CDY26965 | Canola | nucleus | 41.18 | 38.25 |
| KRH30553 | Soybean | nucleus, plastid | 45.59 | 37.8 |
| CDY69109 | Canola | nucleus | 41.18 | 37.63 |
| GSMUA_Achr10P... | Banana | nucleus | 33.53 | 32.48 |
| Bra020223.1-P | Field mustard | nucleus | 26.18 | 29.97 |
| GSMUA_Achr10P... | Banana | nucleus | 35.0 | 29.9 |
| Bra020224.1-P | Field mustard | nucleus | 25.88 | 29.24 |
| GSMUA_Achr11P... | Banana | nucleus | 18.82 | 28.57 |
| GSMUA_Achr5P01170_001 | Banana | nucleus | 31.18 | 26.97 |
| GSMUA_Achr6P21380_001 | Banana | nucleus | 17.94 | 25.74 |
| GSMUA_Achr6P18840_001 | Banana | nucleus | 30.88 | 25.42 |
| GSMUA_Achr9P12600_001 | Banana | nucleus | 20.88 | 22.83 |
| GSMUA_Achr6P01410_001 | Banana | nucleus | 18.82 | 22.78 |
| GSMUA_Achr3P03850_001 | Banana | plastid | 20.29 | 21.36 |
| GSMUA_Achr8P25650_001 | Banana | nucleus, plastid | 18.82 | 21.33 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.29 | 21.1 |
| GSMUA_Achr5P26210_001 | Banana | nucleus | 17.06 | 20.79 |
| GSMUA_AchrUn_... | Banana | plastid | 19.71 | 20.49 |
| GSMUA_Achr6P03470_001 | Banana | nucleus | 19.12 | 20.38 |
| GSMUA_Achr3P11870_001 | Banana | nucleus | 20.29 | 20.29 |
| GSMUA_Achr4P01560_001 | Banana | nucleus | 19.12 | 20.19 |
| Bra002437.1-P | Field mustard | nucleus | 14.71 | 20.08 |
| GSMUA_Achr9P22340_001 | Banana | nucleus | 21.18 | 19.73 |
| GSMUA_Achr3P11050_001 | Banana | cytosol, nucleus, plastid | 19.71 | 19.65 |
| GSMUA_Achr1P16530_001 | Banana | nucleus | 20.29 | 19.11 |
| GSMUA_Achr4P06350_001 | Banana | nucleus | 17.06 | 18.71 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.82 | 18.6 |
| GSMUA_Achr5P09960_001 | Banana | endoplasmic reticulum, nucleus, plastid | 19.41 | 15.31 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P02230_001 | EnsemblPlants:GSMUA_Achr11T02230_001 | EnsemblPlantsGene:GSMUA_Achr11G02230_001 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF41 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000296049B |
| UniProt:M0RNQ3 | MapMan:15.5.15 | : | : | : | : |
Description
Putative Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G02230_001]
Coordinates
chr11:+:1511727..1512749
Molecular Weight (calculated)
37423.5 Da
IEP (calculated)
8.715
GRAVY (calculated)
-0.465
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDILYSSAG AAASGTDQIT SSHALLYSLS VLREKVQQLE SCVSMMTSPN RTQQESIAMG VSCAGIMIQE IILAASSLSC TLPQVGPSTA VAYEEPPPSD
101: MKVESATAWM DHSSNNSLGI TRKDDFFSSN NPSANSAIDV DNGSVTRDQI RKVKPPLDRA GMRKECSQGL SSNGYTIIEL DAADLLAKYT HYCQVCGKGF
201: RRDANLRMHM RAHGDEYKSA AALANPTKSS RSSSSGVALK YSCPHDGCRW NRKHAKFQPL KSVVCAKNHY KRSHCPKMYV CNRCNLKQFS VLSDLRTHEK
301: HCGDLRWRCS CGTNFSRKDK LMGHVALFVG HTPEPCRLRD
101: MKVESATAWM DHSSNNSLGI TRKDDFFSSN NPSANSAIDV DNGSVTRDQI RKVKPPLDRA GMRKECSQGL SSNGYTIIEL DAADLLAKYT HYCQVCGKGF
201: RRDANLRMHM RAHGDEYKSA AALANPTKSS RSSSSGVALK YSCPHDGCRW NRKHAKFQPL KSVVCAKNHY KRSHCPKMYV CNRCNLKQFS VLSDLRTHEK
301: HCGDLRWRCS CGTNFSRKDK LMGHVALFVG HTPEPCRLRD
001: MHIHMMNRDE HIAKKVEGSI SSFSGETSTS SKQIYVNPVT TTGTKSMEDD DVSLSLLYNL STLHEKVHQI QSLVSFYMVS TNNINQSSGS TSLAVANIGS
101: LVQEIITAAS SMLYTCQQLQ IGSNNNNNDI DNDQTVDAMV LEFSRQETDP GHDFVQESTN LFGVQERGQI SFPDQNLDWY NTETINPKKD KHRSKPSSGS
201: YDILELDVAD LLAKYTHYCQ ICGKGFKRDA NLRMHMRAHG DEYKTREALI SPTSQDKKGG YSLKKHYYSC PQHGCRWNQR HEKFQPLKSV ICAKNHYKRS
301: HCPKMYMCRR CSVKHFSVLS DLRTHEKHCG DIKWVCSCGT KFSRKDKLMS HVSLFLGHVP AHGSSKPPTI TLK
101: LVQEIITAAS SMLYTCQQLQ IGSNNNNNDI DNDQTVDAMV LEFSRQETDP GHDFVQESTN LFGVQERGQI SFPDQNLDWY NTETINPKKD KHRSKPSSGS
201: YDILELDVAD LLAKYTHYCQ ICGKGFKRDA NLRMHMRAHG DEYKTREALI SPTSQDKKGG YSLKKHYYSC PQHGCRWNQR HEKFQPLKSV ICAKNHYKRS
301: HCPKMYMCRR CSVKHFSVLS DLRTHEKHCG DIKWVCSCGT KFSRKDKLMS HVSLFLGHVP AHGSSKPPTI TLK
Arabidopsis Description
STOP2Protein SENSITIVE TO PROTON RHIZOTOXICITY 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WT24]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.