Factsheet for AT5G22890.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09179	Canola	nucleus	63.0	72.53
CDY09178	Canola	nucleus	69.71	70.46
CDY31715	Canola	nucleus	70.51	69.95
CDY26966	Canola	nucleus	70.51	69.95
CDX74505	Canola	nucleus	70.51	69.95
CDX98183	Canola	nucleus	70.51	69.95
Bra002438.1-P	Field mustard	nucleus	70.24	69.68
CDY26965	Canola	nucleus	67.29	68.58
CDY69109	Canola	nucleus	67.29	67.47
Bra020224.1-P	Field mustard	nucleus	53.62	66.45
Bra020223.1-P	Field mustard	nucleus	52.55	65.99
Bra002437.1-P	Field mustard	nucleus	35.66	53.41
GSMUA_Achr1P15330_001	Banana	cytosol	39.68	52.67
KRH22822	Soybean	plastid	36.46	48.92
PGSC0003DMT400001105	Potato	nucleus	39.14	45.91
VIT_06s0061g00780.t01	Wine grape	nucleus	47.72	45.64
GSMUA_Achr11P...	Banana	nucleus	40.75	44.71
Solyc11g066420.1.1	Tomato	nucleus, plastid	44.5	43.23
TraesCS1A01G060200.1	Wheat	nucleus	41.29	40.1
TraesCS1B01G078700.1	Wheat	nucleus	41.82	39.8
Os08t0562300-01	Rice	nucleus	41.02	39.74
TraesCS1D01G061200.1	Wheat	nucleus	40.48	39.02
Zm00001d031895_P001	Maize	nucleus	41.02	36.52
OQU80698	Sorghum	nucleus	41.29	36.24
Os04t0165200-01	Rice	nucleus	35.12	35.31
AT1G34370.1	Thale cress	nucleus	33.78	25.25
AT1G34790.1	Thale cress	nucleus	17.96	22.11
AT1G51220.1	Thale cress	nucleus	19.3	21.36
AT1G13290.1	Thale cress	nucleus	16.89	20.86
AT1G08290.1	Thale cress	nucleus	18.5	20.47
AT3G57670.1	Thale cress	nucleus	19.84	19.32
AT3G20880.1	Thale cress	nucleus	19.03	17.23

Protein Annotations

MapMan:15.5.15	Gene3D:3.30.160.60	EntrezGene:832353	ProteinID:AED93094.1	EMBL:AK227740	ArrayExpress:AT5G22890
EnsemblPlantsGene:AT5G22890	RefSeq:AT5G22890	TAIR:AT5G22890	RefSeq:AT5G22890-TAIR-G	EnsemblPlants:AT5G22890.1	TAIR:AT5G22890.1
Unigene:At.31036	ProteinID:BAB10610.1	EMBL:BT004810	GO:GO:0003674	GO:GO:0003676	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628
GO:GO:0009719	GO:GO:0009987	GO:GO:0010044	GO:GO:0010200	GO:GO:0010447	GO:GO:0046872
InterPro:IPR013087	RefSeq:NP_197680.2	PO:PO:0009005	ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR10593
PANTHER:PTHR10593:SF41	UniProt:Q0WT24	SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI0000196E63	InterPro:Znf_C2H2_sf
InterPro:Znf_C2H2_type	SEG:seg	:	:	:	:

Description

STOP2Protein SENSITIVE TO PROTON RHIZOTOXICITY 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WT24]

Coordinates

chr5:-:7653257..7654835

Molecular Weight (calculated)

42252.0 Da

IEP (calculated)

8.530

GRAVY (calculated)

-0.647

Length

373 amino acids

Sequence
(BLAST)

001: MHIHMMNRDE HIAKKVEGSI SSFSGETSTS SKQIYVNPVT TTGTKSMEDD DVSLSLLYNL STLHEKVHQI QSLVSFYMVS TNNINQSSGS TSLAVANIGS
101: LVQEIITAAS SMLYTCQQLQ IGSNNNNNDI DNDQTVDAMV LEFSRQETDP GHDFVQESTN LFGVQERGQI SFPDQNLDWY NTETINPKKD KHRSKPSSGS
201: YDILELDVAD LLAKYTHYCQ ICGKGFKRDA NLRMHMRAHG DEYKTREALI SPTSQDKKGG YSLKKHYYSC PQHGCRWNQR HEKFQPLKSV ICAKNHYKRS
301: HCPKMYMCRR CSVKHFSVLS DLRTHEKHCG DIKWVCSCGT KFSRKDKLMS HVSLFLGHVP AHGSSKPPTI TLK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.