Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46467 | Canola | nucleus | 82.77 | 84.63 |
| CDX91774 | Canola | nucleus | 83.97 | 84.48 |
| Bra036750.1-P | Field mustard | nucleus | 82.57 | 83.91 |
| CDY03148 | Canola | nucleus | 68.74 | 79.58 |
| CDY12041 | Canola | nucleus | 62.32 | 76.04 |
| Bra040971.1-P | Field mustard | nucleus | 64.73 | 75.82 |
| Solyc06g065440.1.1 | Tomato | cytosol | 44.29 | 62.96 |
| VIT_18s0072g00840.t01 | Wine grape | nucleus | 62.32 | 59.01 |
| PGSC0003DMT400067092 | Potato | nucleus | 48.3 | 55.66 |
| GSMUA_Achr5P01170_001 | Banana | nucleus | 43.49 | 55.22 |
| Solyc11g017140.1.1 | Tomato | nucleus | 53.11 | 54.64 |
| PGSC0003DMT400023881 | Potato | nucleus | 54.31 | 52.83 |
| KRH08551 | Soybean | nucleus, plastid | 54.91 | 52.59 |
| GSMUA_Achr6P18840_001 | Banana | nucleus | 42.08 | 50.85 |
| KXG33778 | Sorghum | nucleus | 48.7 | 46.82 |
| Zm00001d012260_P001 | Maize | nucleus | 48.5 | 46.63 |
| Os01t0871200-03 | Rice | nucleus | 48.1 | 45.98 |
| TraesCS3A01G381900.1 | Wheat | nucleus | 47.29 | 45.56 |
| TraesCS3D01G375000.1 | Wheat | nucleus | 47.29 | 45.38 |
| Zm00001d042686_P001 | Maize | nucleus | 47.09 | 45.37 |
| TraesCS3B01G414500.1 | Wheat | nucleus | 46.89 | 45.0 |
| AT5G22890.1 | Thale cress | nucleus | 25.25 | 33.78 |
| AT1G34790.1 | Thale cress | nucleus | 14.23 | 23.43 |
| AT1G08290.1 | Thale cress | nucleus | 15.23 | 22.55 |
| AT1G51220.1 | Thale cress | nucleus | 15.03 | 22.26 |
| AT1G13290.1 | Thale cress | nucleus | 12.83 | 21.19 |
| AT3G57670.1 | Thale cress | nucleus | 15.43 | 20.1 |
| AT3G20880.1 | Thale cress | nucleus | 14.83 | 17.96 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EntrezGene:840339 | UniProt:A0A178WM47 | ProteinID:AAG51898.1 | ProteinID:AEE31703.1 |
| ProteinID:AEE31704.1 | EMBL:AK227128 | ArrayExpress:AT1G34370 | EnsemblPlantsGene:AT1G34370 | RefSeq:AT1G34370 | TAIR:AT1G34370 |
| RefSeq:AT1G34370-TAIR-G | EnsemblPlants:AT1G34370.1 | TAIR:AT1G34370.1 | EMBL:AY087985 | Unigene:At.64018 | ProteinID:BAF62148.1 |
| ProteinID:BAF62149.1 | ProteinID:BAF62150.1 | ProteinID:BAF62151.1 | ProteinID:BAF62152.1 | ProteinID:BAF62153.1 | ProteinID:BAF62154.1 |
| ProteinID:BAF62155.1 | ProteinID:BAF62156.1 | ProteinID:BAF62157.1 | ProteinID:BAF62158.1 | ProteinID:BAG16782.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0010044 | GO:GO:0010447 | GO:GO:0046872 |
| InterPro:IPR013087 | RefSeq:NP_174697.1 | RefSeq:NP_849746.1 | ProteinID:OAP18573.1 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00028 |
| PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF41 | UniProt:Q9C8N5 | SMART:SM00355 | SUPFAM:SSF57667 |
| Symbol:STOP1 | UniParc:UPI00000A01D1 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : |
Description
STOP1Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8N5]
Coordinates
chr1:+:12550339..12552629
Molecular Weight (calculated)
55209.8 Da
IEP (calculated)
6.134
GRAVY (calculated)
-0.615
Length
499 amino acids
Sequence
(BLAST)
(BLAST)
001: METEDDLCNT NWGSSSSKSR EPGSSDCGNS TFAGFTSQQK WEDASILDYE MGVEPGLQES IQANVDFLQG VRAQAWDPRT MLSNLSFMEQ KIHQLQDLVH
101: LLVGRGGQLQ GRQDELAAQQ QQLITTDLTS IIIQLISTAG SLLPSVKHNM STAPGPFTGQ PGSAVFPYVR EANNVASQSQ NNNNCGAREF DLPKPVLVDE
201: REGHVVEEHE MKDEDDVEEG ENLPPGSYEI LQLEKEEILA PHTHFCTICG KGFKRDANLR MHMRGHGDEY KTAAALAKPN KESVPGSEPM LIKRYSCPFL
301: GCKRNKEHKK FQPLKTILCV KNHYKRTHCD KSFTCSRCHT KKFSVIADLK THEKHCGKNK WLCSCGTTFS RKDKLFGHIA LFQGHTPAIP LEETKPSAST
401: STQRGSSEGG NNNQGMVGFN LGSASNANQE TTQPGMTDGR ICFEESFSPM NFDTCNFGGF HEFPRLMFDD SESSFQMLIA NACGFSPRNV GESVSDTSL
101: LLVGRGGQLQ GRQDELAAQQ QQLITTDLTS IIIQLISTAG SLLPSVKHNM STAPGPFTGQ PGSAVFPYVR EANNVASQSQ NNNNCGAREF DLPKPVLVDE
201: REGHVVEEHE MKDEDDVEEG ENLPPGSYEI LQLEKEEILA PHTHFCTICG KGFKRDANLR MHMRGHGDEY KTAAALAKPN KESVPGSEPM LIKRYSCPFL
301: GCKRNKEHKK FQPLKTILCV KNHYKRTHCD KSFTCSRCHT KKFSVIADLK THEKHCGKNK WLCSCGTTFS RKDKLFGHIA LFQGHTPAIP LEETKPSAST
401: STQRGSSEGG NNNQGMVGFN LGSASNANQE TTQPGMTDGR ICFEESFSPM NFDTCNFGGF HEFPRLMFDD SESSFQMLIA NACGFSPRNV GESVSDTSL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.