CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 5
plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34957	Soybean	nucleus, plastid	72.74	74.75
KRG91822	Soybean	nucleus, plastid	72.74	74.46
VIT_18s0072g00840.t01	Wine grape	nucleus	63.72	63.0
Solyc06g065440.1.1	Tomato	cytosol	41.27	61.25
CDY12041	Canola	nucleus	45.87	58.44
Bra040971.1-P	Field mustard	nucleus	47.41	57.98
PGSC0003DMT400067092	Potato	nucleus	47.98	57.74
CDY46467	Canola	nucleus	53.74	57.38
Solyc11g017140.1.1	Tomato	nucleus	53.36	57.32
CDY03148	Canola	nucleus	47.41	57.31
Bra036750.1-P	Field mustard	nucleus	53.55	56.82
CDX91774	Canola	nucleus	53.74	56.45
GSMUA_Achr5P01170_001	Banana	nucleus	41.84	55.47
AT1G34370.1	Thale cress	nucleus	52.59	54.91
PGSC0003DMT400023881	Potato	nucleus	53.93	54.78
KXG33778	Sorghum	nucleus	49.52	49.71
GSMUA_Achr6P18840_001	Banana	nucleus	39.35	49.64
Zm00001d012260_P001	Maize	nucleus	49.33	49.52
TraesCS3D01G375000.1	Wheat	nucleus	48.94	49.04
TraesCS3A01G381900.1	Wheat	nucleus	48.75	49.03
TraesCS3B01G414500.1	Wheat	nucleus	48.56	48.65
Os01t0871200-03	Rice	nucleus	48.56	48.47
Zm00001d042686_P001	Maize	nucleus	48.18	48.46
KRH22822	Soybean	plastid	22.84	42.81
KRG97571	Soybean	nucleus, plastid	25.53	39.35
KRH25207	Soybean	nucleus	10.56	37.16
KRH43171	Soybean	nucleus, plastid	22.65	37.11
KRH31302	Soybean	nucleus, plastid	25.53	36.54
KRH59322	Soybean	nucleus	22.46	35.78
KRH26538	Soybean	nucleus, plastid	25.91	32.93
KRH30553	Soybean	nucleus, plastid	25.91	32.93
KRH25115	Soybean	nucleus	24.95	32.83
KRH18924	Soybean	nucleus	13.63	29.96
KRH16750	Soybean	nucleus	13.63	28.51
KRG92027	Soybean	nucleus	14.59	27.74
KRH34760	Soybean	nucleus	14.4	27.47
KRH10191	Soybean	nucleus, plastid	16.7	25.22
KRG95308	Soybean	nucleus, plastid	16.89	25.21
KRH66988	Soybean	nucleus	16.89	24.58
KRH23146	Soybean	nucleus, plastid	16.31	24.29
KRH43510	Soybean	nucleus, plastid	16.12	24.28
KRH13927	Soybean	nucleus, plastid	15.74	23.98
KRH75477	Soybean	nucleus	15.16	23.8
KRH30442	Soybean	nucleus	14.97	23.64
KRH27491	Soybean	nucleus, plastid	15.93	23.58
KRH20837	Soybean	nucleus, plastid	16.12	23.53
KRH71956	Soybean	nucleus, plastid	16.7	23.45
KRH22690	Soybean	nucleus	14.2	23.2
KRH24697	Soybean	nucleus, plastid	15.16	23.17
KRH29701	Soybean	nucleus	15.16	23.17
KRH70598	Soybean	nucleus	14.78	23.05
KRH26622	Soybean	nucleus	14.2	23.05
KRH33045	Soybean	nucleus, plastid	16.7	22.54
KRH25208	Soybean	nucleus, plastid	4.03	12.0

Protein Annotations

EntrezGene:100500526	MapMan:15.5.15	Gene3D:3.30.160.60	EMBL:ACUP02010183	EnsemblPlantsGene:GLYMA_16G156400	GO:GO:0003674
GO:GO:0003676	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009628	GO:GO:0009987	GO:GO:0010044	GO:GO:0010447	UniProt:I1MNY2	InterPro:IPR013087
EnsemblPlants:KRH08551	ProteinID:KRH08551	ProteinID:KRH08551.1	ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR10593
PANTHER:PTHR10593:SF41	SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI0001E24119	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:+:31658521..31661557

Molecular Weight (calculated)

57526.2 Da

IEP (calculated)

6.200

GRAVY (calculated)

-0.695

Length

521 amino acids

Sequence
(BLAST)

001: MDSNGSLRAN TWARSSSLTS PASGLSSDPL SFPGFGLQHN QQKWDVPSNS DFGIRAEAPF KEFNQPSQTQ SPLPCNSNNE IEIPGQENCH LSESSQTNTL
101: QDWDPSVMLN NLSFLEEKIH QLQDLVHLIA RQKGIGQPNE LVTQEQQLVT TDLTSIIIQL ISTAGSLLPS ARHNLVNTSS LVGQIDQLRG TTIPPGTGAS
201: NGCIQPQNNG GKILSDQSMQ TDLPNSGEME QKYNMVEHDL KDEEDVEDGE NLAPGSYEIL QLEKEEILAP HTHFCTICGK GFKRDANLRM HMRGHGDEYK
301: TPAALAKPHK ESASPKPIKR YSCPYPGCKR NKDHKKFQPL KTILCVKNHY KRTHCDKSYT CSRCNTKKFS VMADLKTHEK HCGKDKWLCS CGTTFSRKDK
401: LFGHIALFQG HAPAIPLDDT KGAGVAEAPI HDSKENNSKV QSMNFTFGSN PSNANEVPNA MDVKGDSDDP INYFSSLNFE ANFGEFNEFT RPLFDDPEGS
501: FSFVMPGSFK SGGESSSDNL L

Best Arabidopsis Sequence Match ( AT1G34370.2 )
(BLAST)

001: METEDDLCNT NWGSSSSKSR EPGSSDCGNS TFAGFTSQQK WEDASILDYE MGVEPGLQES IQANVDFLQG VRAQAWDPRT MLSNLSFMEQ KIHQLQDLVH
101: LLVGRGGQLQ GRQDELAAQQ QQLITTDLTS IIIQLISTAG SLLPSVKHNM STAPGPFTGQ PGSAVFPYVR EANNVASQSQ NNNNCGAREF DLPKPVLVDE
201: REGHVVEEHE MKDEDDVEEG ENLPPGSYEI LQLEKEEILA PHTHFCTICG KGFKRDANLR MHMRGHGDEY KTAAALAKPN KESVPGSEPM LIKRYSCPFL
301: GCKRNKEHKK FQPLKTILCV KNHYKRTHCD KSFTCSRCHT KKFSVIADLK THEKHCGKNK WLCSCGTTFS RKDKLFGHIA LFQGHTPAIP LEETKPSAST
401: STQRGSSEGG NNNQGMVGFN LGSASNANQE TTQPGMTDGR ICFEESFSPM NFDTCNFGGF HEFPRLMFDD SESSFQMLIA NACGFSPRNV GESVSDTSL

Arabidopsis Description

STOP1Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8N5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.