CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31302	Soybean	nucleus, plastid	87.87	81.59
KRH43171	Soybean	nucleus, plastid	48.22	51.26
KRH59322	Soybean	nucleus	48.82	50.46
PGSC0003DMT400008898	Potato	extracellular, nucleus	53.25	48.91
Solyc04g056320.1.1	Tomato	nucleus	53.55	48.53
VIT_07s0141g00020.t01	Wine grape	vacuole	53.85	43.33
GSMUA_Achr10P...	Banana	nucleus	44.67	43.02
OQU85186	Sorghum	nucleus	44.67	41.48
TraesCS6D01G188100.1	Wheat	nucleus	44.08	40.38
TraesCS6A01G201100.1	Wheat	nucleus	43.79	40.11
TraesCS6B01G227100.1	Wheat	nucleus	43.79	39.89
Os02t0572900-01	Rice	cytosol, extracellular, nucleus	43.79	38.54
KRH22822	Soybean	plastid	30.18	36.69
Zm00001d016911_P001	Maize	nucleus	44.67	36.12
KRH25207	Soybean	nucleus	15.09	34.46
KRH25115	Soybean	nucleus	33.73	28.79
KRH26538	Soybean	nucleus, plastid	34.91	28.78
KRH30553	Soybean	nucleus, plastid	34.62	28.54
KRH08551	Soybean	nucleus, plastid	39.35	25.53
KRH34957	Soybean	nucleus, plastid	37.87	25.25
KRG91822	Soybean	nucleus, plastid	37.57	24.95
KRH18924	Soybean	nucleus	17.46	24.89
KRH16750	Soybean	nucleus	17.46	23.69
KRH22690	Soybean	nucleus	21.01	22.26
KRH26622	Soybean	nucleus	21.01	22.12
KRH34760	Soybean	nucleus	17.75	21.98
KRG92027	Soybean	nucleus	17.16	21.17
KRH70598	Soybean	nucleus	20.71	20.96
KRH75477	Soybean	nucleus	20.41	20.78
KRH43510	Soybean	nucleus, plastid	20.41	19.94
KRH13927	Soybean	nucleus, plastid	20.12	19.88
KRH29701	Soybean	nucleus	19.82	19.65
KRG95308	Soybean	nucleus, plastid	20.12	19.48
KRH10191	Soybean	nucleus, plastid	19.82	19.42
KRH30442	Soybean	nucleus	18.93	19.39
KRH24697	Soybean	nucleus, plastid	19.53	19.35
KRH27491	Soybean	nucleus, plastid	20.12	19.32
KRH20837	Soybean	nucleus, plastid	20.12	19.05
KRH71956	Soybean	nucleus, plastid	20.71	18.87
KRH23146	Soybean	nucleus, plastid	19.53	18.86
KRH66988	Soybean	nucleus	19.82	18.72
KRH33045	Soybean	nucleus, plastid	20.41	17.88
KRH25208	Soybean	nucleus, plastid	3.85	7.43

Protein Annotations

EntrezGene:100796506	MapMan:15.5.15	Gene3D:3.30.160.60	EMBL:ACUP02010800	EnsemblPlantsGene:GLYMA_18G016700	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	UniProt:I1MYR4	InterPro:IPR013087	EnsemblPlants:KRG97571	ProteinID:KRG97571
ProteinID:KRG97571.1	PFAM:PF00096	ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR10593	PANTHER:PTHR10593:SF71
SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI000233EB23	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg

Description

hypothetical protein

Coordinates

chr18:-:1192570..1193911

Molecular Weight (calculated)

37987.1 Da

IEP (calculated)

7.026

GRAVY (calculated)

-0.540

Length

338 amino acids

Sequence
(BLAST)

001: MSNSISDPTR IIHSQDPNTT ADPQVPLRNL SQVRNRMDSL QHFLSQSINT NTPLTVDQIA MVSSQILSSI HQVIVNGAAL VSYSQNSIAA GAPDPPPYPK
101: KPKPEPSVAD KAKQTLDSKL EPLEGDDSEI VELDAVEILA EHMHFCEICG KGFRRDANLR MHMRAHGEQF KTAEALAKPS EKASWLRATR FSCPFVGCNR
201: NKLHRRFRPL KSVICVKNHF KRSHCPKMYT CERCRKKHFS VLSDLRSHLK HCGGEARWKC TCGTTFSRKD KLFGHIALFE GHAPALACDS EGKGKQMVED
301: DEDPMLMSES GFELDDCFLD QEFPEGFFDD FGSIDDYC

Best Arabidopsis Sequence Match ( AT1G34370.3 )
(BLAST)

001: MKDEDDVEEG ENLPPGSYEI LQLEKEEILA PHTHFCTICG KGFKRDANLR MHMRGHGDEY KTAAALAKPN KESVPGSEPM LIKRYSCPFL GCKRNKEHKK
101: FQPLKTILCV KNHYKRTHCD KSFTCSRCHT KKFSVIADLK THEKHCGKNK WLCSCGTTFS RKDKLFGHIA LFQGHTPAIP LEETKPSAST STQRGSSEGG
201: NNNQGMVGFN LGSASNANQE TTQPGMTDGR ICFEESFSPM NFDTCNFGGF HEFPRLMFDD SESSFQMLIA NACGFSPRNV GESVSDTSL

Arabidopsis Description

STOP1Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8N5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.