Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH25207 | Soybean | nucleus | 44.24 | 98.65 |
| KRH26622 | Soybean | nucleus | 76.36 | 78.5 |
| KRH22690 | Soybean | nucleus | 75.45 | 78.06 |
| VIT_06s0080g00270.t01 | Wine grape | plastid | 69.39 | 65.99 |
| GSMUA_Achr5P26210_001 | Banana | nucleus | 49.09 | 58.06 |
| PGSC0003DMT400018308 | Potato | nucleus, plastid | 56.06 | 56.75 |
| KRH18924 | Soybean | nucleus | 40.3 | 56.12 |
| KRH25208 | Soybean | nucleus, plastid | 29.09 | 54.86 |
| KRH34760 | Soybean | nucleus | 44.55 | 53.85 |
| KRH16750 | Soybean | nucleus | 40.61 | 53.82 |
| CDY06308 | Canola | nucleus | 54.85 | 53.71 |
| CDY22690 | Canola | nucleus | 54.85 | 53.71 |
| KRG92027 | Soybean | nucleus | 44.55 | 53.65 |
| Bra031621.1-P | Field mustard | nucleus | 53.94 | 52.82 |
| CDX95075 | Canola | nucleus | 53.64 | 52.37 |
| Bra018638.1-P | Field mustard | nucleus | 53.33 | 52.23 |
| CDX93575 | Canola | nucleus | 53.03 | 51.93 |
| AT1G08290.1 | Thale cress | nucleus | 52.42 | 51.34 |
| KRH24697 | Soybean | nucleus, plastid | 46.97 | 45.45 |
| KRH29701 | Soybean | nucleus | 46.67 | 45.16 |
| KRH10191 | Soybean | nucleus, plastid | 46.97 | 44.93 |
| KRH43510 | Soybean | nucleus, plastid | 46.97 | 44.8 |
| KRH13927 | Soybean | nucleus, plastid | 46.06 | 44.44 |
| KRH27491 | Soybean | nucleus, plastid | 47.27 | 44.32 |
| KRH23146 | Soybean | nucleus, plastid | 46.67 | 44.0 |
| KRH75477 | Soybean | nucleus | 44.24 | 43.98 |
| KRH70598 | Soybean | nucleus | 44.24 | 43.71 |
| KRG95308 | Soybean | nucleus, plastid | 46.06 | 43.55 |
| KRH20837 | Soybean | nucleus, plastid | 46.67 | 43.14 |
| KRH66988 | Soybean | nucleus | 46.06 | 42.46 |
| KRH71956 | Soybean | nucleus, plastid | 47.58 | 42.32 |
| Os01t0859100-01 | Rice | nucleus, plastid | 47.27 | 41.49 |
| Solyc06g074360.2.1 | Tomato | nucleus | 26.36 | 41.23 |
| KRH33045 | Soybean | nucleus, plastid | 47.58 | 40.67 |
| TraesCS3D01G364800.1 | Wheat | nucleus | 45.15 | 40.6 |
| TraesCS3B01G404000.1 | Wheat | nucleus | 45.45 | 40.32 |
| Os05t0444200-01 | Rice | plastid | 46.97 | 39.85 |
| EES18308 | Sorghum | plastid | 46.06 | 37.72 |
| TraesCS1D01G276200.1 | Wheat | nucleus, plastid | 41.82 | 37.6 |
| TraesCS1B01G285900.1 | Wheat | nucleus, plastid | 42.12 | 37.57 |
| Zm00001d038297_P001 | Maize | nucleus | 44.24 | 37.24 |
| EES03920 | Sorghum | plastid | 45.45 | 37.22 |
| Zm00001d042781_P001 | Maize | nucleus | 45.15 | 36.88 |
| TraesCS1A01G276800.1 | Wheat | nucleus, plastid | 41.52 | 36.15 |
| Zm00001d010131_P001 | Maize | nucleus, plastid | 43.03 | 36.04 |
| TraesCS3A01G371700.1 | Wheat | cytosol, plastid | 45.15 | 34.89 |
| KRH22822 | Soybean | plastid | 20.0 | 23.74 |
| KRH43171 | Soybean | nucleus, plastid | 19.39 | 20.13 |
| KRH59322 | Soybean | nucleus | 19.7 | 19.88 |
| KRG97571 | Soybean | nucleus, plastid | 19.39 | 18.93 |
| KRH30553 | Soybean | nucleus, plastid | 22.12 | 17.8 |
| KRH25115 | Soybean | nucleus | 21.21 | 17.68 |
| KRH31302 | Soybean | nucleus, plastid | 19.39 | 17.58 |
| KRH26538 | Soybean | nucleus, plastid | 21.82 | 17.56 |
| KRH08551 | Soybean | nucleus, plastid | 23.64 | 14.97 |
| KRH34957 | Soybean | nucleus, plastid | 22.73 | 14.79 |
| KRG91822 | Soybean | nucleus, plastid | 22.73 | 14.73 |
Protein Annotations
| EntrezGene:100788451 | MapMan:15.5.15 | Gene3D:3.30.160.60 | EMBL:ACUP02007011 | EnsemblPlantsGene:GLYMA_11G184000 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | UniProt:I1LKS6 | InterPro:IPR013087 | EnsemblPlants:KRH30442 | ProteinID:KRH30442 |
| ProteinID:KRH30442.1 | PFAM:PF13912 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF58 |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000233C258 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg |
Description
hypothetical protein
Coordinates
chr11:+:25213709..25217468
Molecular Weight (calculated)
37897.7 Da
IEP (calculated)
7.956
GRAVY (calculated)
-0.833
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLMECNVED NKNLYLHAPT FIEWLKPCSS PNYSYLNNSN TILSSSSSPS SSFSFTHNQF VQETIQFLPI LSEKKASKDE EDQTFDEVKE EKVKQVTVAL
101: HIGLPDTSKG HADDEVVDEK MIFHVKEEEE ESSKRSFHGC SFNNNQERRF WIPTPAQILV GPMQFACSIC SKTFNRYNNM QMHMWGHGSE FRKGPDSLKG
201: SQPAAMLRLP CYCCAQGCKN NINHPRAKPL KDFRTLQTHY KRKHGTKPFM CRKCGKTFAV KGDWRTHEKN CGKLWYCTCG SDFKHKRSLK DHIRSFGKGH
301: KPHPPFEAFE DEKECITTGS DEDEVNAHHT
101: HIGLPDTSKG HADDEVVDEK MIFHVKEEEE ESSKRSFHGC SFNNNQERRF WIPTPAQILV GPMQFACSIC SKTFNRYNNM QMHMWGHGSE FRKGPDSLKG
201: SQPAAMLRLP CYCCAQGCKN NINHPRAKPL KDFRTLQTHY KRKHGTKPFM CRKCGKTFAV KGDWRTHEKN CGKLWYCTCG SDFKHKRSLK DHIRSFGKGH
301: KPHPPFEAFE DEKECITTGS DEDEVNAHHT
001: MNSYETKGLS FESPSFIEWL KPQSSTTSSK SVLYRGKTRD AISRSNHHQS QMNMLERSLF LYQPQEPLNT SIQCLPLLNK LMENNSQASD IKEENKDDVV
101: TLQIGFPKYH RGSSEDGSDI TFDHQKKPIK REIIEDGVVM MKKRRKMKFD EEIIDSDVEV CGKRFWIPSP AQIHVGPMQF ACSICSKTFN RYNNMQMHMW
201: GHGSEFRKGA DSLKGTIQPA AILRLPCYCC AEGCKNNINH PRSKPLKDFR TLQTHYKRKH GSKPFSCGKC GKALAVKGDW RTHEKNCGKL WYCTCGSDFK
301: HKRSLKDHIR SFGSGHSPHP SLLFDGFEED TECVTTE
101: TLQIGFPKYH RGSSEDGSDI TFDHQKKPIK REIIEDGVVM MKKRRKMKFD EEIIDSDVEV CGKRFWIPSP AQIHVGPMQF ACSICSKTFN RYNNMQMHMW
201: GHGSEFRKGA DSLKGTIQPA AILRLPCYCC AEGCKNNINH PRSKPLKDFR TLQTHYKRKH GSKPFSCGKC GKALAVKGDW RTHEKNCGKL WYCTCGSDFK
301: HKRSLKDHIR SFGSGHSPHP SLLFDGFEED TECVTTE
Arabidopsis Description
WIP3Zinc finger protein WIP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.