CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 5
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22822	Soybean	plastid	58.78	86.69
KRH25115	Soybean	nucleus	55.37	57.32
GSMUA_Achr1P15330_001	Banana	cytosol	38.05	55.52
KRH30553	Soybean	nucleus, plastid	55.37	55.37
VIT_06s0061g00780.t01	Wine grape	nucleus	50.98	53.59
PGSC0003DMT400001105	Potato	nucleus	40.98	52.83
Solyc11g066420.1.1	Tomato	nucleus, plastid	46.1	49.22
GSMUA_Achr11P...	Banana	nucleus	39.51	47.65
KRG97571	Soybean	nucleus, plastid	28.78	34.91
KRH43171	Soybean	nucleus, plastid	27.07	34.91
KRH59322	Soybean	nucleus	27.32	34.25
KRH25207	Soybean	nucleus	11.95	33.11
KRH31302	Soybean	nucleus, plastid	28.29	31.87
KRH34957	Soybean	nucleus, plastid	33.17	26.82
KRG92027	Soybean	nucleus	17.8	26.64
KRH18924	Soybean	nucleus	15.37	26.58
KRG91822	Soybean	nucleus, plastid	32.93	26.52
KRH16750	Soybean	nucleus	16.1	26.51
KRH34760	Soybean	nucleus	17.56	26.37
KRH08551	Soybean	nucleus, plastid	32.93	25.91
KRH29701	Soybean	nucleus	18.29	21.99
KRH75477	Soybean	nucleus	17.8	21.99
KRH30442	Soybean	nucleus	17.56	21.82
KRH24697	Soybean	nucleus, plastid	18.05	21.7
KRH22690	Soybean	nucleus	16.83	21.63
KRH70598	Soybean	nucleus	17.56	21.56
KRH26622	Soybean	nucleus	16.83	21.5
KRH66988	Soybean	nucleus	18.54	21.23
KRG95308	Soybean	nucleus, plastid	17.8	20.92
KRH10191	Soybean	nucleus, plastid	17.56	20.87
KRH23146	Soybean	nucleus, plastid	17.56	20.57
KRH71956	Soybean	nucleus, plastid	17.8	19.68
KRH43510	Soybean	nucleus, plastid	16.1	19.08
KRH27491	Soybean	nucleus, plastid	16.34	19.03
KRH13927	Soybean	nucleus, plastid	15.85	19.01
KRH33045	Soybean	nucleus, plastid	17.8	18.91
KRH20837	Soybean	nucleus, plastid	16.34	18.77
KRH25208	Soybean	nucleus, plastid	5.61	13.14

Protein Annotations

EntrezGene:100802769	MapMan:15.5.15	Gene3D:3.30.160.60	EMBL:ACUP02007718	EnsemblPlantsGene:GLYMA_12G179000	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	InterPro:IPR013087	UniProt:K7LVM1	EnsemblPlants:KRH26538	ProteinID:KRH26538
ProteinID:KRH26538.1	ProteinID:KRH26539.1	ProteinID:KRH26540.1	ProteinID:KRH26541.1	ScanProsite:PS00028	PFscan:PS50157
PANTHER:PTHR10593	PANTHER:PTHR10593:SF41	SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI000233C41C	InterPro:Znf_C2H2_sf
InterPro:Znf_C2H2_type	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:+:33883831..33886351

Molecular Weight (calculated)

45177.4 Da

IEP (calculated)

8.116

GRAVY (calculated)

-0.514

Length

410 amino acids

Sequence
(BLAST)

001: MISRATSSFQ SVHHQGLQMF PDAEDFVSPS VESGSGTSHS SSLLFNLSIL KDKLSEVQTL VGVILSPNQS LPESTSMAIS SMNSTIQEIV VTATSMMFTC
101: QQMALTAPPG TNNNTNKLHH HQNKSLPHSS NINFATNGSC VLGNNIGTDN ISDHHGLFSS TESETLDWFS ESYNNNDDNS NSNIISKVAI SENNIITRGG
201: GGGGVLSPRD EPNEEGLSPK MNSDDIIIEL DAANLLAKYT HYCQVCGKGF KRDANLRMHM RAHGDEYKTN AALSNPIKNQ RDLECLMSVK PKRYSCPQEG
301: CRWNQRHAKF QPLKSMICAK NHYKRSHCPK MYVCKRCNQK QFSVLSDLRT HEKHCGDLKW LCSCGTSFSR KDKLMGHVAL FVGHQPAINN NGLSYSGKLI
401: RAAPHIANAD

Best Arabidopsis Sequence Match ( AT5G22890.1 )
(BLAST)

001: MHIHMMNRDE HIAKKVEGSI SSFSGETSTS SKQIYVNPVT TTGTKSMEDD DVSLSLLYNL STLHEKVHQI QSLVSFYMVS TNNINQSSGS TSLAVANIGS
101: LVQEIITAAS SMLYTCQQLQ IGSNNNNNDI DNDQTVDAMV LEFSRQETDP GHDFVQESTN LFGVQERGQI SFPDQNLDWY NTETINPKKD KHRSKPSSGS
201: YDILELDVAD LLAKYTHYCQ ICGKGFKRDA NLRMHMRAHG DEYKTREALI SPTSQDKKGG YSLKKHYYSC PQHGCRWNQR HEKFQPLKSV ICAKNHYKRS
301: HCPKMYMCRR CSVKHFSVLS DLRTHEKHCG DIKWVCSCGT KFSRKDKLMS HVSLFLGHVP AHGSSKPPTI TLK

Arabidopsis Description

STOP2Protein SENSITIVE TO PROTON RHIZOTOXICITY 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WT24]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.