CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG95394
KRH16959
KRH53667
KRH64261
KRH67075

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G22890.1	KRG95394	AT2G19650.1	21798944
AT5G22890.1	KRH67075	AT2G19650.1	21798944
AT5G22890.1	KRH16959	AT3G49580.1	21798944
AT5G22890.1	KRH53667	AT3G49580.1	21798944
AT5G22890.1	KRH64261	AT3G49580.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26538	Soybean	nucleus, plastid	86.69	58.78
GSMUA_Achr1P15330_001	Banana	cytosol	45.68	45.2
KRH25115	Soybean	nucleus	62.95	44.19
KRH30553	Soybean	nucleus, plastid	64.39	43.66
CDY09179	Canola	nucleus	48.92	41.98
GSMUA_Achr11P...	Banana	nucleus	46.76	38.24
CDY26965	Canola	nucleus	49.64	37.7
CDY69109	Canola	nucleus	49.64	37.1
AT5G22890.1	Thale cress	nucleus	48.92	36.46
CDY26966	Canola	nucleus	49.28	36.44
CDY31715	Canola	nucleus	48.92	36.17
CDX98183	Canola	nucleus	48.92	36.17
CDX74505	Canola	nucleus	48.92	36.17
Bra002438.1-P	Field mustard	nucleus	48.92	36.17
Os08t0562300-01	Rice	nucleus	50.0	36.1
CDY09178	Canola	nucleus	47.12	35.5
TraesCS1A01G060200.1	Wheat	nucleus	47.12	34.11
TraesCS1B01G078700.1	Wheat	nucleus	47.84	33.93
TraesCS1D01G061200.1	Wheat	nucleus	46.76	33.59
KRH25207	Soybean	nucleus	17.63	33.11
OQU80698	Sorghum	nucleus	49.28	32.24
Zm00001d031895_P001	Maize	nucleus	48.56	32.22
Os04t0165200-01	Rice	nucleus	42.45	31.81
KRG97571	Soybean	nucleus, plastid	36.69	30.18
KRH43171	Soybean	nucleus, plastid	34.17	29.87
KRH59322	Soybean	nucleus	33.81	28.75
KRH31302	Soybean	nucleus, plastid	36.69	28.02
Bra020224.1-P	Field mustard	nucleus	29.14	26.91
Bra020223.1-P	Field mustard	nucleus	27.7	25.93
KRG92027	Soybean	nucleus	24.1	24.45
KRH34760	Soybean	nucleus	23.74	24.18
KRH16750	Soybean	nucleus	20.86	23.29
KRH18924	Soybean	nucleus	19.78	23.21
KRH34957	Soybean	nucleus, plastid	41.73	22.88
KRH08551	Soybean	nucleus, plastid	42.81	22.84
KRG91822	Soybean	nucleus, plastid	41.73	22.79
KRH30442	Soybean	nucleus	23.74	20.0
KRH75477	Soybean	nucleus	23.38	19.58
KRH22690	Soybean	nucleus	21.94	19.12
KRH24697	Soybean	nucleus, plastid	23.38	19.06
KRH29701	Soybean	nucleus	23.38	19.06
KRH26622	Soybean	nucleus	21.94	19.0
KRG95308	Soybean	nucleus, plastid	23.74	18.91
KRH70598	Soybean	nucleus	22.66	18.86
KRH66988	Soybean	nucleus	24.1	18.72
KRH23146	Soybean	nucleus, plastid	22.66	18.0
KRH10191	Soybean	nucleus, plastid	22.3	17.97
KRH71956	Soybean	nucleus, plastid	23.74	17.79
KRH43510	Soybean	nucleus, plastid	21.58	17.34
KRH13927	Soybean	nucleus, plastid	21.22	17.25
KRH33045	Soybean	nucleus, plastid	23.74	17.1
KRH27491	Soybean	nucleus, plastid	21.22	16.76
KRH20837	Soybean	nucleus, plastid	21.22	16.53
Bra002437.1-P	Field mustard	nucleus	14.39	16.06
KRH25208	Soybean	nucleus, plastid	5.4	8.57

Protein Annotations

MapMan:15.5.15	Gene3D:3.30.160.60	UniProt:A0A0R0GXF0	EMBL:ACUP02008437	EnsemblPlantsGene:GLYMA_13G321800	GO:GO:0003674
GO:GO:0003700	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009719
GO:GO:0009987	GO:GO:0010044	GO:GO:0010200	GO:GO:0010447	EnsemblPlants:KRH22822	ProteinID:KRH22822
ProteinID:KRH22822.1	PANTHER:PTHR10593	PANTHER:PTHR10593:SF41	UniParc:UPI0006ED5DEE	SEG:seg	:

Description

hypothetical protein

Coordinates

chr13:-:41610278..41611513

Molecular Weight (calculated)

30938.3 Da

IEP (calculated)

9.059

GRAVY (calculated)

-0.418

Length

278 amino acids

Sequence
(BLAST)

001: MISRATSSFP SVHHQGLQMF PDPEGFVSPS EESGSSGTTS HSSSLLFNLS ILKDKLSEVQ TLVGVILSPN QSLPEPTSMA ISSMNSIIQE IIVTATSMMF
101: TCQQMALTTP PGFERDANLR MHMRAHGDEY KTNAALSNPI KNKGNLLEGG RECLMSTVKP KYSCPQEGCR WNQRHVKFQP LKSMICAKNH YKRSHCPKMY
201: VCKRCNQKQF SVLSDLRTHE KHCGDLKWQC TCGTSFSRKD KLMGHVALFV GHQPAAAINN SNALSFSAKL EQQHTLQM

Best Arabidopsis Sequence Match ( AT1G34370.1 )
(BLAST)

001: METEDDLCNT NWGSSSSKSR EPGSSDCGNS TFAGFTSQQK WEDASILDYE MGVEPGLQES IQANVDFLQG VRAQAWDPRT MLSNLSFMEQ KIHQLQDLVH
101: LLVGRGGQLQ GRQDELAAQQ QQLITTDLTS IIIQLISTAG SLLPSVKHNM STAPGPFTGQ PGSAVFPYVR EANNVASQSQ NNNNCGAREF DLPKPVLVDE
201: REGHVVEEHE MKDEDDVEEG ENLPPGSYEI LQLEKEEILA PHTHFCTICG KGFKRDANLR MHMRGHGDEY KTAAALAKPN KESVPGSEPM LIKRYSCPFL
301: GCKRNKEHKK FQPLKTILCV KNHYKRTHCD KSFTCSRCHT KKFSVIADLK THEKHCGKNK WLCSCGTTFS RKDKLFGHIA LFQGHTPAIP LEETKPSAST
401: STQRGSSEGG NNNQGMVGFN LGSASNANQE TTQPGMTDGR ICFEESFSPM NFDTCNFGGF HEFPRLMFDD SESSFQMLIA NACGFSPRNV GESVSDTSL

Arabidopsis Description

STOP1Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8N5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.