Subcellular Localization
min:
: max
Winner_takes_all: nucleus, plastid
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH13927 | Soybean | nucleus, plastid | 84.97 | 85.96 |
| PGSC0003DMT400017556 | Potato | nucleus | 34.39 | 83.22 |
| KRH25207 | Soybean | nucleus | 30.64 | 71.62 |
| KRH27491 | Soybean | nucleus, plastid | 64.45 | 63.35 |
| KRH20837 | Soybean | nucleus, plastid | 63.01 | 61.06 |
| VIT_13s0064g01060.t01 | Wine grape | nucleus | 60.4 | 60.93 |
| Solyc01g087050.2.1 | Tomato | nucleus | 52.02 | 60.4 |
| KRH18924 | Soybean | nucleus | 38.44 | 56.12 |
| KRG95308 | Soybean | nucleus, plastid | 54.05 | 53.58 |
| KRH16750 | Soybean | nucleus | 38.44 | 53.41 |
| KRH10191 | Soybean | nucleus, plastid | 53.18 | 53.33 |
| KRH66988 | Soybean | nucleus | 54.34 | 52.51 |
| KRH23146 | Soybean | nucleus, plastid | 52.6 | 52.0 |
| KRH24697 | Soybean | nucleus, plastid | 50.0 | 50.73 |
| KRH29701 | Soybean | nucleus | 49.71 | 50.44 |
| KRH71956 | Soybean | nucleus, plastid | 53.76 | 50.13 |
| GSMUA_Achr4P06350_001 | Banana | nucleus | 44.22 | 49.35 |
| GSMUA_Achr9P22340_001 | Banana | nucleus | 52.02 | 49.32 |
| KRH22690 | Soybean | nucleus | 44.51 | 48.28 |
| KRH33045 | Soybean | nucleus, plastid | 53.47 | 47.93 |
| KRG92027 | Soybean | nucleus | 37.86 | 47.81 |
| KRH26622 | Soybean | nucleus | 44.22 | 47.66 |
| KRH34760 | Soybean | nucleus | 37.57 | 47.62 |
| TraesCS7A01G404400.1 | Wheat | nucleus | 50.0 | 47.01 |
| KRH30442 | Soybean | nucleus | 44.8 | 46.97 |
| TraesCS7B01G304000.1 | Wheat | nucleus | 50.0 | 46.76 |
| TraesCS7D01G397800.1 | Wheat | nucleus | 50.0 | 46.76 |
| Zm00001d036812_P001 | Maize | nucleus | 50.0 | 44.47 |
| Zm00001d046774_P001 | Maize | nucleus | 50.58 | 43.97 |
| EER88644 | Sorghum | nucleus, plastid | 50.87 | 43.56 |
| KRH70598 | Soybean | nucleus | 39.88 | 41.32 |
| KRH75477 | Soybean | nucleus | 39.02 | 40.66 |
| Os06t0612300-01 | Rice | endoplasmic reticulum, vacuole | 50.87 | 39.55 |
| KRH25208 | Soybean | nucleus, plastid | 14.74 | 29.14 |
| KRH22822 | Soybean | plastid | 17.34 | 21.58 |
| KRG97571 | Soybean | nucleus, plastid | 19.94 | 20.41 |
| KRH43171 | Soybean | nucleus, plastid | 17.92 | 19.5 |
| KRH31302 | Soybean | nucleus, plastid | 20.23 | 19.23 |
| KRH59322 | Soybean | nucleus | 17.92 | 18.96 |
| KRH25115 | Soybean | nucleus | 19.36 | 16.92 |
| KRH30553 | Soybean | nucleus, plastid | 19.65 | 16.59 |
| KRH08551 | Soybean | nucleus, plastid | 24.28 | 16.12 |
| KRH26538 | Soybean | nucleus, plastid | 19.08 | 16.1 |
| KRH34957 | Soybean | nucleus, plastid | 23.41 | 15.98 |
| KRG91822 | Soybean | nucleus, plastid | 23.12 | 15.72 |
Protein Annotations
| EntrezGene:100818131 | MapMan:15.5.15 | EMBL:ACUP02004867 | EnsemblPlantsGene:GLYMA_08G154500 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | UniProt:I1KTM1 | InterPro:IPR013087 | EnsemblPlants:KRH43510 | ProteinID:KRH43510 | ProteinID:KRH43510.1 |
| PFAM:PF13912 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF72 | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI00023380FE | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr8:-:11904829..11907224
Molecular Weight (calculated)
38806.9 Da
IEP (calculated)
8.135
GRAVY (calculated)
-0.697
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MTDPKSNLYT ETFNFMPLYS HLSSFSTSQS NLFSSYSNNN TFAIQSETSS SYAPPSPPLR EALPLINNIS LRKQKEKNEP SKSGGGMVEE EGGKKRDMDE
101: TTLLMTSTTT EEGDAETVTV ALQIGLPSVA ASDDLNGSRK IPAACAQMNE KEDARSVISG HPFDRLNKVQ YWIPTPSQIL IGPTQFLCHV CSKSFNRYNN
201: LQMHMWGHGS QYRKGPDSLK GTQPSAMLRL PCFCCAPGCK HNIDHPRARP LKDFRTLQTH YKRKHGIKPY MCRKCDKTFA VKGDWRTHEK NCGKIWYCLC
301: GSDFKHKRSL KDHIKAFGHG HGAVDIDCMQ EDEAASEIEH DGDISM
101: TTLLMTSTTT EEGDAETVTV ALQIGLPSVA ASDDLNGSRK IPAACAQMNE KEDARSVISG HPFDRLNKVQ YWIPTPSQIL IGPTQFLCHV CSKSFNRYNN
201: LQMHMWGHGS QYRKGPDSLK GTQPSAMLRL PCFCCAPGCK HNIDHPRARP LKDFRTLQTH YKRKHGIKPY MCRKCDKTFA VKGDWRTHEK NCGKIWYCLC
301: GSDFKHKRSL KDHIKAFGHG HGAVDIDCMQ EDEAASEIEH DGDISM
001: MYNNNQYSFS GDEDSVVLSL GPPGQQYPSH NKPTSTKPSS DHEFNHPLTN PNGVTVALHI GPPSSDKETL SGGNNQEGLT ARQGQYWIPS LSQILVGPTQ
101: FSCSVCNKTF NRFNNMQMHM WGHGSQYRKG PESLRGTKSS SSILRLPCYC CAEGCKNNID HPRSKPLKDF RTLQTHYKRK HGAKPFRCRK KCEKTFAVRG
201: DWRTHEKNCG KLWFCVCGSD FKHKRSLKDH VRAFGDGHAA HTVSDRVVGI GDADEDDEEE EEEEEDDVEE EDAHEENVRG EKNYGIRYDH FRRYGQISDD
301: NY
101: FSCSVCNKTF NRFNNMQMHM WGHGSQYRKG PESLRGTKSS SSILRLPCYC CAEGCKNNID HPRSKPLKDF RTLQTHYKRK HGAKPFRCRK KCEKTFAVRG
201: DWRTHEKNCG KLWFCVCGSD FKHKRSLKDH VRAFGDGHAA HTVSDRVVGI GDADEDDEEE EEEEEDDVEE EDAHEENVRG EKNYGIRYDH FRRYGQISDD
301: NY
Arabidopsis Description
WIP6Zinc finger protein WIP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FX68]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.