Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92027 | Soybean | nucleus | 90.11 | 89.78 |
| PGSC0003DMT400096573 | Potato | cytosol, mitochondrion, nucleus, peroxisome | 41.39 | 73.86 |
| KRH25207 | Soybean | nucleus | 38.1 | 70.27 |
| VIT_01s0011g03100.t01 | Wine grape | nucleus | 64.84 | 64.36 |
| GSMUA_Achr6P21380_001 | Banana | nucleus | 50.55 | 58.23 |
| Solyc05g009770.1.1 | Tomato | nucleus | 60.07 | 57.34 |
| KRH75477 | Soybean | nucleus | 68.13 | 56.02 |
| KRH70598 | Soybean | nucleus | 67.77 | 55.39 |
| AT1G13290.1 | Thale cress | nucleus | 59.71 | 53.97 |
| KRH18924 | Soybean | nucleus | 46.15 | 53.16 |
| CDY19385 | Canola | nucleus | 57.88 | 51.97 |
| KRH16750 | Soybean | nucleus | 46.89 | 51.41 |
| Bra019822.1-P | Field mustard | nucleus | 57.88 | 51.3 |
| CDX97995 | Canola | nucleus | 57.88 | 51.3 |
| GSMUA_Achr6P01410_001 | Banana | nucleus | 52.38 | 50.89 |
| CDY26642 | Canola | nucleus | 52.75 | 48.65 |
| KRH22690 | Soybean | nucleus | 53.48 | 45.77 |
| TraesCS5B01G177600.1 | Wheat | nucleus, plastid | 52.75 | 45.57 |
| KRH26622 | Soybean | nucleus | 53.48 | 45.48 |
| KRH30442 | Soybean | nucleus | 53.85 | 44.55 |
| KRG95308 | Soybean | nucleus, plastid | 54.21 | 42.41 |
| KRH10191 | Soybean | nucleus, plastid | 53.48 | 42.32 |
| KRH24697 | Soybean | nucleus, plastid | 52.38 | 41.94 |
| KRH29701 | Soybean | nucleus | 52.38 | 41.94 |
| KRH66988 | Soybean | nucleus | 54.58 | 41.62 |
| KRH23146 | Soybean | nucleus, plastid | 53.11 | 41.43 |
| TraesCS5D01G184400.1 | Wheat | nucleus | 53.85 | 41.41 |
| TraesCS5A01G179800.1 | Wheat | nucleus | 53.48 | 41.13 |
| KRH71956 | Soybean | nucleus, plastid | 53.48 | 39.35 |
| EER96535 | Sorghum | nucleus | 53.11 | 39.19 |
| Zm00001d020037_P001 | Maize | nucleus | 53.85 | 39.1 |
| KRH27491 | Soybean | nucleus, plastid | 50.18 | 38.92 |
| Zm00001d005566_P001 | Maize | nucleus | 53.85 | 38.79 |
| KRH20837 | Soybean | nucleus, plastid | 50.18 | 38.38 |
| KRH33045 | Soybean | nucleus, plastid | 53.48 | 37.82 |
| KRH13927 | Soybean | nucleus, plastid | 47.25 | 37.72 |
| KRH43510 | Soybean | nucleus, plastid | 47.62 | 37.57 |
| Os09t0307400-00 | Rice | nucleus | 52.75 | 36.55 |
| GSMUA_Achr5P09960_001 | Banana | endoplasmic reticulum, nucleus, plastid | 56.78 | 35.96 |
| KRH25208 | Soybean | nucleus, plastid | 16.12 | 25.14 |
| KRH22822 | Soybean | plastid | 24.18 | 23.74 |
| KRH43171 | Soybean | nucleus, plastid | 20.88 | 17.92 |
| KRG97571 | Soybean | nucleus, plastid | 21.98 | 17.75 |
| KRH59322 | Soybean | nucleus | 21.25 | 17.74 |
| KRH26538 | Soybean | nucleus, plastid | 26.37 | 17.56 |
| KRH31302 | Soybean | nucleus, plastid | 22.71 | 17.03 |
| KRH25115 | Soybean | nucleus | 23.81 | 16.41 |
| KRH30553 | Soybean | nucleus, plastid | 24.54 | 16.34 |
| KRH08551 | Soybean | nucleus, plastid | 27.47 | 14.4 |
| KRH34957 | Soybean | nucleus, plastid | 26.37 | 14.2 |
| KRG91822 | Soybean | nucleus, plastid | 26.01 | 13.95 |
Protein Annotations
| EMBL:ACUP02006626 | EnsemblPlants:KRH34760 | EnsemblPlantsGene:GLYMA_10G204300 | EntrezGene:100788243 | Gene3D:3.30.160.60 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR10593 |
| PANTHER:PTHR10593:SF61 | PFscan:PS50157 | ProteinID:KRH34760 | ProteinID:KRH34760.1 | ScanProsite:PS00028 | SEG:seg |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000233C1C7 | UniProt:K7LKI4 | MapMan:15.5.15 | : |
Description
hypothetical protein
Coordinates
chr10:+:43548881..43550560
Molecular Weight (calculated)
30951.5 Da
IEP (calculated)
8.715
GRAVY (calculated)
-0.806
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MQKTYSFSFI SSSGSDSACY LEADEVDNED SISLSLAPPS QHQFKSKVSN PKHSSTMPDH HQQNPDLISG VTVALHIGLP TTKPSSPTPI HCRYWIPTPQ
101: QILIGPTQFS CTVCNKTFNR FNNMQMHMWG HGSQYRKGAE SLRGSKAGSS MLRLPCYCCE EGCKNNINYP RSKPLKDFRT LQTHYKRKHG GKPFECRKCH
201: KPFAVRGDWR THEKNCGKLW FCVCGSDFKH KRSLKDHVRA FGNGHAPHNL LSEERENEGG DDDDNEVVVF TFK
101: QILIGPTQFS CTVCNKTFNR FNNMQMHMWG HGSQYRKGAE SLRGSKAGSS MLRLPCYCCE EGCKNNINYP RSKPLKDFRT LQTHYKRKHG GKPFECRKCH
201: KPFAVRGDWR THEKNCGKLW FCVCGSDFKH KRSLKDHVRA FGNGHAPHNL LSEERENEGG DDDDNEVVVF TFK
001: MYNNNQYSFS GDEDSVVLSL GPPGQQYPSH NKPTSTKPSS DHEFNHPLTN PNGVTVALHI GPPSSDKETL SGGNNQEGLT ARQGQYWIPS LSQILVGPTQ
101: FSCSVCNKTF NRFNNMQMHM WGHGSQYRKG PESLRGTKSS SSILRLPCYC CAEGCKNNID HPRSKPLKDF RTLQTHYKRK HGAKPFRCRK KCEKTFAVRG
201: DWRTHEKNCG KLWFCVCGSD FKHKRSLKDH VRAFGDGHAA HTVSDRVVGI GDADEDDEEE EEEEEDDVEE EDAHEENVRG EKNYGIRYDH FRRYGQISDD
301: NY
101: FSCSVCNKTF NRFNNMQMHM WGHGSQYRKG PESLRGTKSS SSILRLPCYC CAEGCKNNID HPRSKPLKDF RTLQTHYKRK HGAKPFRCRK KCEKTFAVRG
201: DWRTHEKNCG KLWFCVCGSD FKHKRSLKDH VRAFGDGHAA HTVSDRVVGI GDADEDDEEE EEEEEDDVEE EDAHEENVRG EKNYGIRYDH FRRYGQISDD
301: NY
Arabidopsis Description
WIP6Zinc finger protein WIP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FX68]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.