Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G13290.1 | Thale cress | nucleus | 71.96 | 70.53 |
| CDX97995 | Canola | nucleus | 73.31 | 70.45 |
| CDY19385 | Canola | nucleus | 71.96 | 70.07 |
| PGSC0003DMT400096573 | Potato | cytosol, mitochondrion, nucleus, peroxisome | 35.14 | 67.97 |
| VIT_01s0011g03100.t01 | Wine grape | nucleus | 50.68 | 54.55 |
| KRH34760 | Soybean | nucleus | 48.65 | 52.75 |
| GSMUA_Achr6P21380_001 | Banana | nucleus | 42.23 | 52.74 |
| KRG92027 | Soybean | nucleus | 48.31 | 52.19 |
| CDY57608 | Canola | nucleus | 41.89 | 51.67 |
| Solyc05g009770.1.1 | Tomato | nucleus | 49.66 | 51.4 |
| CDX67704 | Canola | nucleus | 42.23 | 50.81 |
| KRH70598 | Soybean | nucleus | 53.38 | 47.31 |
| KRH75477 | Soybean | nucleus | 53.04 | 47.29 |
| GSMUA_Achr6P01410_001 | Banana | nucleus | 43.58 | 45.91 |
| TraesCS5B01G177600.1 | Wheat | nucleus, plastid | 47.3 | 44.3 |
| CDY12025 | Canola | nucleus | 40.2 | 41.46 |
| CDY03134 | Canola | nucleus | 39.53 | 40.77 |
| TraesCS5D01G184400.1 | Wheat | nucleus | 47.64 | 39.72 |
| TraesCS5A01G179800.1 | Wheat | nucleus | 47.3 | 39.44 |
| CDY29624 | Canola | nucleus | 44.26 | 38.53 |
| CDY06390 | Canola | nucleus | 43.24 | 38.32 |
| CDX72006 | Canola | nucleus | 47.97 | 38.07 |
| CDY35565 | Canola | nucleus | 43.58 | 38.05 |
| CDY06083 | Canola | nucleus | 47.97 | 37.97 |
| CDX88959 | Canola | nucleus | 46.62 | 37.91 |
| CDY22834 | Canola | nucleus, plastid | 43.24 | 37.87 |
| CDY25224 | Canola | nucleus | 43.24 | 37.87 |
| EER96535 | Sorghum | nucleus | 47.3 | 37.84 |
| CDX93575 | Canola | nucleus | 42.57 | 37.39 |
| CDX95075 | Canola | nucleus | 42.57 | 37.28 |
| CDY22690 | Canola | nucleus | 41.89 | 36.8 |
| Zm00001d020037_P001 | Maize | nucleus | 46.62 | 36.7 |
| CDY06308 | Canola | nucleus | 41.55 | 36.5 |
| CDY57920 | Canola | nucleus | 44.26 | 36.49 |
| Zm00001d005566_P001 | Maize | nucleus | 46.62 | 36.41 |
| CDY27556 | Canola | nucleus | 43.92 | 36.31 |
| Os09t0307400-00 | Rice | nucleus | 47.97 | 36.04 |
| GSMUA_Achr5P09960_001 | Banana | endoplasmic reticulum, nucleus, plastid | 46.96 | 32.25 |
| CDY09179 | Canola | nucleus | 20.95 | 19.14 |
| CDY31715 | Canola | nucleus | 22.64 | 17.82 |
| CDX98183 | Canola | nucleus | 22.64 | 17.82 |
| CDX74505 | Canola | nucleus | 22.64 | 17.82 |
| CDY09178 | Canola | nucleus | 21.96 | 17.62 |
| CDY26966 | Canola | nucleus | 22.3 | 17.55 |
| CDY26965 | Canola | nucleus | 21.62 | 17.49 |
| CDY69109 | Canola | nucleus | 21.96 | 17.47 |
| CDY12041 | Canola | nucleus | 22.3 | 16.14 |
| CDY03148 | Canola | nucleus | 21.28 | 14.62 |
| CDY46467 | Canola | nucleus | 21.28 | 12.91 |
| CDX91774 | Canola | nucleus | 21.28 | 12.7 |
Protein Annotations
| EnsemblPlants:CDY26642 | EnsemblPlantsGene:GSBRNA2T00035521001 | Gene3D:3.30.160.60 | GO:A0A078GN79 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF52 |
| PFscan:PS50157 | ProteinID:CDY26642 | ProteinID:CDY26642.1 | ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 |
| UniParc:UPI0004EEB55D | UniProt:A0A078GN79 | MapMan:15.5.15 | : | : | : |
Description
BnaA09g46350DBnaA09g46350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GN79]
Coordinates
chrLK032192:-:469344..470768
Molecular Weight (calculated)
34096.8 Da
IEP (calculated)
6.503
GRAVY (calculated)
-0.861
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVLFSLSSL SLSISLSPPS PRLWIGRLMN KNSWPTIPIN IKLSSNHEID QNLLLTNPND VTVSLHIGPP VSDKETNTHE NNQEGLTARQ QGQYWVPSLS
101: QILVGPTQFS CSVCNKTFNR FNNMQMHMWG HGSQYRKATM LYCYCCAEGC KNNIDHPRAK PLKDFRTLQT HYKRKHGAKP FHCRKKCEKT FAVRGDWRTH
201: EKNCGKLWFC VWGSDFKHKR SLKDHVRAFG DGHAAHTVGD RVVAIGHGEE DDDGDDDDDD DMEEEEEEDE QNIEEVDVDG EKNYEYGHFR RNTQIF
101: QILVGPTQFS CSVCNKTFNR FNNMQMHMWG HGSQYRKATM LYCYCCAEGC KNNIDHPRAK PLKDFRTLQT HYKRKHGAKP FHCRKKCEKT FAVRGDWRTH
201: EKNCGKLWFC VWGSDFKHKR SLKDHVRAFG DGHAAHTVGD RVVAIGHGEE DDDGDDDDDD DMEEEEEEDE QNIEEVDVDG EKNYEYGHFR RNTQIF
001: MYNNNQYSFS GDEDSVVLSL GPPGQQYPSH NKPTSTKPSS DHEFNHPLTN PNGVTVALHI GPPSSDKETL SGGNNQEGLT ARQGQYWIPS LSQILVGPTQ
101: FSCSVCNKTF NRFNNMQMHM WGHGSQYRKG PESLRGTKSS SSILRLPCYC CAEGCKNNID HPRSKPLKDF RTLQTHYKRK HGAKPFRCRK KCEKTFAVRG
201: DWRTHEKNCG KLWFCVCGSD FKHKRSLKDH VRAFGDGHAA HTVSDRVVGI GDADEDDEEE EEEEEDDVEE EDAHEENVRG EKNYGIRYDH FRRYGQISDD
301: NY
101: FSCSVCNKTF NRFNNMQMHM WGHGSQYRKG PESLRGTKSS SSILRLPCYC CAEGCKNNID HPRSKPLKDF RTLQTHYKRK HGAKPFRCRK KCEKTFAVRG
201: DWRTHEKNCG KLWFCVCGSD FKHKRSLKDH VRAFGDGHAA HTVSDRVVGI GDADEDDEEE EEEEEDDVEE EDAHEENVRG EKNYGIRYDH FRRYGQISDD
301: NY
Arabidopsis Description
WIP6Zinc finger protein WIP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FX68]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.