Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018638.1-P | Field mustard | nucleus | 97.93 | 98.22 |
| CDX93575 | Canola | nucleus | 97.63 | 97.92 |
| AT1G08290.1 | Thale cress | nucleus | 85.5 | 85.76 |
| KRH25207 | Soybean | nucleus | 34.62 | 79.05 |
| CDY22690 | Canola | nucleus | 60.35 | 60.53 |
| CDY06308 | Canola | nucleus | 59.76 | 59.94 |
| KRH26622 | Soybean | nucleus | 53.25 | 56.07 |
| KRH22690 | Soybean | nucleus | 52.66 | 55.8 |
| CDY57608 | Canola | nucleus | 39.35 | 55.42 |
| CDX67704 | Canola | nucleus | 39.94 | 54.88 |
| PGSC0003DMT400018308 | Potato | nucleus, plastid | 52.37 | 54.29 |
| KRH30442 | Soybean | nucleus | 52.37 | 53.64 |
| VIT_06s0080g00270.t01 | Wine grape | plastid | 54.14 | 52.74 |
| GSMUA_Achr5P26210_001 | Banana | nucleus | 41.72 | 50.54 |
| CDY12025 | Canola | nucleus | 39.94 | 47.04 |
| CDY03134 | Canola | nucleus | 39.65 | 46.69 |
| CDY19385 | Canola | nucleus | 39.65 | 44.08 |
| CDY06390 | Canola | nucleus | 43.49 | 44.01 |
| CDY29624 | Canola | nucleus | 43.79 | 43.53 |
| CDX97995 | Canola | nucleus | 39.65 | 43.51 |
| CDY22834 | Canola | nucleus, plastid | 43.2 | 43.2 |
| CDY25224 | Canola | nucleus | 42.9 | 42.9 |
| CDX88959 | Canola | nucleus | 46.15 | 42.86 |
| CDY35565 | Canola | nucleus | 42.9 | 42.77 |
| CDY26642 | Canola | nucleus | 37.28 | 42.57 |
| Solyc06g074360.2.1 | Tomato | nucleus | 26.33 | 42.18 |
| CDX72006 | Canola | nucleus | 46.45 | 42.09 |
| CDY06083 | Canola | nucleus | 46.15 | 41.71 |
| CDY27556 | Canola | nucleus | 44.08 | 41.62 |
| CDY57920 | Canola | nucleus | 44.08 | 41.5 |
| Os01t0859100-01 | Rice | nucleus, plastid | 44.38 | 39.89 |
| TraesCS3D01G364800.1 | Wheat | nucleus | 42.6 | 39.24 |
| TraesCS3B01G404000.1 | Wheat | nucleus | 42.9 | 38.98 |
| Os05t0444200-01 | Rice | plastid | 43.49 | 37.79 |
| EES18308 | Sorghum | plastid | 44.97 | 37.72 |
| EES03920 | Sorghum | plastid | 43.79 | 36.72 |
| Zm00001d042781_P001 | Maize | nucleus | 43.79 | 36.63 |
| Zm00001d010131_P001 | Maize | nucleus, plastid | 42.6 | 36.55 |
| TraesCS1D01G276200.1 | Wheat | nucleus, plastid | 39.35 | 36.24 |
| TraesCS1B01G285900.1 | Wheat | nucleus, plastid | 39.65 | 36.22 |
| KRH25208 | Soybean | nucleus, plastid | 18.64 | 36.0 |
| Zm00001d038297_P001 | Maize | nucleus | 41.72 | 35.97 |
| TraesCS1A01G276800.1 | Wheat | nucleus, plastid | 38.76 | 34.56 |
| TraesCS3A01G371700.1 | Wheat | cytosol, plastid | 42.6 | 33.72 |
| CDY09179 | Canola | nucleus | 19.82 | 20.68 |
| CDY26965 | Canola | nucleus | 20.71 | 19.13 |
| CDY69109 | Canola | nucleus | 20.71 | 18.82 |
| CDY26966 | Canola | nucleus | 20.71 | 18.62 |
| CDX74505 | Canola | nucleus | 20.41 | 18.35 |
| CDX98183 | Canola | nucleus | 20.41 | 18.35 |
| CDY31715 | Canola | nucleus | 20.41 | 18.35 |
| CDY03148 | Canola | nucleus | 23.37 | 18.33 |
| CDY09178 | Canola | nucleus | 19.82 | 18.16 |
| CDY12041 | Canola | nucleus | 21.89 | 18.09 |
| CDY46467 | Canola | nucleus | 23.08 | 15.98 |
| CDX91774 | Canola | nucleus | 23.08 | 15.73 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | GO:A0A078E0F4 | EnsemblPlants:CDX95075 | ProteinID:CDX95075 | ProteinID:CDX95075.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00100595001 | InterPro:IPR013087 |
| ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF58 | SMART:SM00355 | SUPFAM:SSF57667 |
| UniParc:UPI0004EB7A83 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : | : |
Description
BnaC05g05960D
Coordinates
chrLK031886:+:988486..990864
Molecular Weight (calculated)
38514.9 Da
IEP (calculated)
8.106
GRAVY (calculated)
-0.703
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLRNLHEMG LSFESPSFIE WLKAPSSSSS SLLFRIKTKD VVISRSNHQS MLERSLFSYQ TQEPLNTSIQ CLPLLNKLME NESQALDDIK EEKDDDDVVT
101: LQIGLPNYHR GSSVEDDSDT TSDHHQKSPI KREMIDDGVV MMKKRRKMII DEEMNDLDME VCGKRFWIPS PAQIHVGPMQ FACTICSKTF NRYNNMQMHM
201: WGHGSEFRKG ADSLKGTTQP AAILRLPCYC CAEGCKNNIN HPRAKPLKDF RTLQTHYKRK HGSKPFSCGK CGKALAVKGD WRTHEKNCGK LWYCTCGSDF
301: KHKRSLKDHI KSFGNGHSPH PSLSFGGFEE DTECVTTE
101: LQIGLPNYHR GSSVEDDSDT TSDHHQKSPI KREMIDDGVV MMKKRRKMII DEEMNDLDME VCGKRFWIPS PAQIHVGPMQ FACTICSKTF NRYNNMQMHM
201: WGHGSEFRKG ADSLKGTTQP AAILRLPCYC CAEGCKNNIN HPRAKPLKDF RTLQTHYKRK HGSKPFSCGK CGKALAVKGD WRTHEKNCGK LWYCTCGSDF
301: KHKRSLKDHI KSFGNGHSPH PSLSFGGFEE DTECVTTE
001: MNSYETKGLS FESPSFIEWL KPQSSTTSSK SVLYRGKTRD AISRSNHHQS QMNMLERSLF LYQPQEPLNT SIQCLPLLNK LMENNSQASD IKEENKDDVV
101: TLQIGFPKYH RGSSEDGSDI TFDHQKKPIK REIIEDGVVM MKKRRKMKFD EEIIDSDVEV CGKRFWIPSP AQIHVGPMQF ACSICSKTFN RYNNMQMHMW
201: GHGSEFRKGA DSLKGTIQPA AILRLPCYCC AEGCKNNINH PRSKPLKDFR TLQTHYKRKH GSKPFSCGKC GKALAVKGDW RTHEKNCGKL WYCTCGSDFK
301: HKRSLKDHIR SFGSGHSPHP SLLFDGFEED TECVTTE
101: TLQIGFPKYH RGSSEDGSDI TFDHQKKPIK REIIEDGVVM MKKRRKMKFD EEIIDSDVEV CGKRFWIPSP AQIHVGPMQF ACSICSKTFN RYNNMQMHMW
201: GHGSEFRKGA DSLKGTIQPA AILRLPCYCC AEGCKNNINH PRSKPLKDFR TLQTHYKRKH GSKPFSCGKC GKALAVKGDW RTHEKNCGKL WYCTCGSDFK
301: HKRSLKDHIR SFGSGHSPHP SLLFDGFEED TECVTTE
Arabidopsis Description
WIP3Zinc finger protein WIP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.