Factsheet for Os05t0444200-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0282100-00	Rice	cytosol, mitochondrion, nucleus	25.45	68.75
KRH25207	Soybean	nucleus	25.19	66.22
Os09t0485600-01	Rice	cytosol, mitochondrion, nucleus	25.19	63.64
EES18308	Sorghum	plastid	64.52	62.28
Zm00001d010131_P001	Maize	nucleus, plastid	60.67	59.9
Os01t0859100-01	Rice	nucleus, plastid	57.84	59.84
Zm00001d038297_P001	Maize	nucleus	58.35	57.91
GSMUA_Achr11P...	Banana	nucleus	33.16	57.59
Os02t0196100-01	Rice	cytosol, extracellular, nucleus	30.85	54.55
GSMUA_Achr5P26210_001	Banana	nucleus	38.82	54.12
KRH22690	Soybean	nucleus	40.36	49.22
KRH26622	Soybean	nucleus	40.1	48.6
PGSC0003DMT400018308	Potato	nucleus, plastid	40.1	47.85
KRH30442	Soybean	nucleus	39.85	46.97
VIT_06s0080g00270.t01	Wine grape	plastid	40.62	45.53
TraesCS1D01G276200.1	Wheat	nucleus, plastid	41.65	44.14
CDX93575	Canola	nucleus	38.05	43.92
TraesCS1A01G276800.1	Wheat	nucleus, plastid	42.67	43.8
Bra018638.1-P	Field mustard	nucleus	37.79	43.62
TraesCS1B01G285900.1	Wheat	nucleus, plastid	41.39	43.51
CDX95075	Canola	nucleus	37.79	43.49
AT1G08290.1	Thale cress	nucleus	37.28	43.03
CDY22690	Canola	nucleus	37.02	42.73
CDY06308	Canola	nucleus	36.76	42.43
Bra031621.1-P	Field mustard	nucleus	36.25	41.84
Solyc06g074360.2.1	Tomato	nucleus	19.79	36.49
Os06t0612300-01	Rice	endoplasmic reticulum, vacuole	40.62	35.51
Os08t0504000-01	Rice	nucleus	38.82	34.47
KRH25208	Soybean	nucleus, plastid	15.17	33.71
Os09t0307400-00	Rice	nucleus	33.68	33.25
Os09t0282300-00	Rice	nucleus	11.57	26.16
Os03t0838800-00	Rice	nucleus	20.05	21.25
Os08t0562300-01	Rice	nucleus	19.54	19.74
Os04t0165200-01	Rice	nucleus	18.77	19.68
Os02t0572900-01	Rice	cytosol, extracellular, nucleus	17.22	17.45
Os12t0170400-01	Rice	nucleus	18.77	15.7
Os01t0871200-03	Rice	nucleus	19.02	14.18

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:15.5.15	Gene3D:3.30.160.60	EntrezGene:4338934	ProteinID:AAT69614.1	ProteinID:BAF17593.1
ProteinID:BAS94268.1	ProteinID:EEE63891.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	InterPro:IPR003616
InterPro:IPR013087	EnsemblPlantsGene:Os05g0444200	EnsemblPlants:Os05t0444200-01	ScanProsite:PS00028	PFscan:PS50157	PFscan:PS50868
PANTHER:PTHR10593	PANTHER:PTHR10593:SF57	InterPro:Post-SET_dom	UniProt:Q6F2N5	SUPFAM:SSF57667	UniParc:UPI00003BF5BD
RefSeq:XP_015640742.1	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg	:	:

Description

Similar to T6J4.5 protein (WIP6 protein). (Os05t0444200-01)

Coordinates

chr5:+:21737310..21739700

Molecular Weight (calculated)

42056.2 Da

IEP (calculated)

6.562

GRAVY (calculated)

-0.661

Length

389 amino acids

Sequence
(BLAST)

001: MVLRACTMVE GSSFVVGGGG GVPFFEWLKP RSSPPPSPSS SSTTTTSSSL TAQRQPRGAG TMLCLPLLGR LGEEPVDADD GGAMNNPPVK EEVSNTTDDY
101: AGVDLNIGLP ATTGGGSSED APMDEDEEDD DDDEEEETED DEEKAAGLEG CKVEEKEREQ VHSEGSKYYV SVGGGEDQSS NAGDVDAGAA CRGRRYWIPT
201: PAQILIGPVQ FVCHVCNKAF NRYNNMQMHM WGHGREYRKG PESLKGTQAT ATLAMLKLPC YCCAAGCRNN VGHPRARPLK DFRTLQTHYK RKHGAKPFAC
301: RRCAKPFAVK GDWRTHEKNC GKRWFCACGS DFKHKRSLND HVRSFGGGHF PVAAAAAAAH AAAAPPKQQQ RIIRFDDAMA QMHGGGLMN

Best Arabidopsis Sequence Match ( AT3G20880.1 )
(BLAST)

001: MLFSTVLSHR TLYILTCPNT LIHSYTHPHI HAYLAFTGFL TQLHHLEISC LLLLFFSLSS LLKLMADPDC IFRNGYVDYY NYSFNYATSL SRIYNSHDSF
101: YYPHQTTNPN INENPNLTSP DSPPLREALP LLSLSPIHKH QEPTANHHEY YFMETTETSS NSNFLDQCQD SYRHDVTVDL HLGLPNLGDG GSSSSDVVLD
201: STDHQEGHHD HHQDQGLEVT MASDHDDEHG GLQRGNHLHH FWIPTPSQIL MGPTQFSCPL CFKTFNRYNN MQMHMWGHGS QYRKGPESLR GTQPTAMLKL
301: PCYCCAPGCK NNIDHPRARP LKDFRTLQTH YKRKHGVRPF ACRRCGKAFA VKGDWRTHEK NCGKLWYCSC GSDFKHKRSL KDHVKAFGNG HVPCCGIDHE
401: EEEAASDVEQ QE

Arabidopsis Description

WIP4Zinc finger protein WIP4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W030]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.