Factsheet for Os12t0170400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023558_P001	Maize	nucleus	56.77	56.53
TraesCS3D01G054300.1	Wheat	nucleus	29.03	50.19
Os03t0838800-00	Rice	nucleus	32.69	41.42
Os01t0871200-03	Rice	nucleus	45.38	40.42
Os09t0282100-00	Rice	cytosol, mitochondrion, nucleus	10.97	35.42
Os09t0485600-01	Rice	cytosol, mitochondrion, nucleus	11.61	35.06
Os02t0196100-01	Rice	cytosol, extracellular, nucleus	15.05	31.82
Os08t0562300-01	Rice	nucleus	26.02	31.43
Os04t0165200-01	Rice	nucleus	24.09	30.19
Os02t0572900-01	Rice	cytosol, extracellular, nucleus	24.73	29.95
Os01t0859100-01	Rice	nucleus, plastid	15.91	19.68
Os09t0307400-00	Rice	nucleus	16.56	19.54
Os05t0444200-01	Rice	plastid	15.7	18.77
Os08t0504000-01	Rice	nucleus	16.13	17.12
Os06t0612300-01	Rice	endoplasmic reticulum, vacuole	15.05	15.73
Os09t0282300-00	Rice	nucleus	3.66	9.88

Protein Annotations

MapMan:15.5.15	Gene3D:3.30.160.60	EntrezGene:4351624	EMBL:AB379846	ProteinID:ABA96557.1	ProteinID:BAF29290.1
ProteinID:BAT16068.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010044	GO:GO:0043620
GO:GO:0045893	GO:GO:0046872	InterPro:IPR013087	EnsemblPlantsGene:Os12g0170400	EnsemblPlants:Os12t0170400-01	PFAM:PF00096
ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR10593	PANTHER:PTHR10593:SF41	UniProt:Q2QX40	SMART:SM00355
SUPFAM:SSF57667	UniParc:UPI0000681976	RefSeq:XP_015620753.1	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg

Description

ALUMINIUM RESISTANCE TRANSCRIPTION FACTOR 1C2H2 zinc-finger transcription factor , Al tolerance (Os12t0170400-01)

Coordinates

chr12:+:3580411..3582838

Molecular Weight (calculated)

50600.4 Da

IEP (calculated)

5.846

GRAVY (calculated)

-0.614

Length

465 amino acids

Sequence
(BLAST)

001: MDRDQMTNTM RDQAANLTSM NPLFYPFMAD DALLGMAPPP PQQLLPSVSI QHMDWSPDTM LDNLTFIEEK IRQVKDVIRS MAGRRASSSS AATPEQQLVN
101: ADLTCLIVQL ISTAGSLLPS LKNSSFLSRT TPPPAAAAGA AQAVSLAAGE SSSSARNNET NREDEEEQMG SPDYDELFKV WTNGGAMDEC VGAAGDEQDA
201: RENPAAAAEE EKYEVLQLEE DEILAPHTHF CGICGKGFKR DANLRMHMRG HGDEYKSAAA LAKPPPPPEG EEQPPQPERR YSCPHAGCKR NRMHASFQPL
301: KTILCVKNHY KRSHCEKRHV CGRCGAKRFS VMADLKTHEK HCGRDRWLCS CGTSFSRKDK LFAHVALFQG HAPALPPPPP PPTSGRRRHK QEEPEFTWGG
401: GGGNEFLDVK GIAGVGSGSG GGDEFFSAGS FGAMDFGFGQ LDASLAMLLP SEQFAGDHQE ENGDK

Best Arabidopsis Sequence Match ( AT1G34370.2 )
(BLAST)

001: METEDDLCNT NWGSSSSKSR EPGSSDCGNS TFAGFTSQQK WEDASILDYE MGVEPGLQES IQANVDFLQG VRAQAWDPRT MLSNLSFMEQ KIHQLQDLVH
101: LLVGRGGQLQ GRQDELAAQQ QQLITTDLTS IIIQLISTAG SLLPSVKHNM STAPGPFTGQ PGSAVFPYVR EANNVASQSQ NNNNCGAREF DLPKPVLVDE
201: REGHVVEEHE MKDEDDVEEG ENLPPGSYEI LQLEKEEILA PHTHFCTICG KGFKRDANLR MHMRGHGDEY KTAAALAKPN KESVPGSEPM LIKRYSCPFL
301: GCKRNKEHKK FQPLKTILCV KNHYKRTHCD KSFTCSRCHT KKFSVIADLK THEKHCGKNK WLCSCGTTFS RKDKLFGHIA LFQGHTPAIP LEETKPSAST
401: STQRGSSEGG NNNQGMVGFN LGSASNANQE TTQPGMTDGR ICFEESFSPM NFDTCNFGGF HEFPRLMFDD SESSFQMLIA NACGFSPRNV GESVSDTSL

Arabidopsis Description

STOP1Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8N5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.