Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G175400.1 | Wheat | nucleus | 58.14 | 32.47 |
| TraesCS5D01G179700.1 | Wheat | nucleus | 57.56 | 32.14 |
| EER98623 | Sorghum | plastid | 45.35 | 24.76 |
| Os06t0612300-01 | Rice | endoplasmic reticulum, vacuole | 38.95 | 15.06 |
| Os08t0504000-01 | Rice | nucleus | 32.56 | 12.79 |
| Os01t0859100-01 | Rice | nucleus, plastid | 27.91 | 12.77 |
| Os02t0196100-01 | Rice | cytosol, extracellular, nucleus | 16.28 | 12.73 |
| Os05t0444200-01 | Rice | plastid | 26.16 | 11.57 |
| Os09t0307400-00 | Rice | nucleus | 18.02 | 7.87 |
| Os03t0838800-00 | Rice | nucleus | 12.21 | 5.72 |
| Os09t0282100-00 | Rice | cytosol, mitochondrion, nucleus | 4.65 | 5.56 |
| Os08t0562300-01 | Rice | nucleus | 11.63 | 5.19 |
| Os04t0165200-01 | Rice | nucleus | 8.72 | 4.04 |
| Os12t0170400-01 | Rice | nucleus | 9.88 | 3.66 |
| Os02t0572900-01 | Rice | cytosol, extracellular, nucleus | 8.14 | 3.65 |
| Os01t0871200-03 | Rice | nucleus | 10.47 | 3.45 |
| TraesCS5B01G172600.1 | Wheat | mitochondrion | 0.58 | 0.73 |
| Os09t0485600-01 | Rice | cytosol, mitochondrion, nucleus | 0.58 | 0.65 |
Protein Annotations
| EnsemblPlants:Os09t0282300-00 | EnsemblPlantsGene:Os09g0282300 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | PANTHER:PTHR10593 |
| PANTHER:PTHR10593:SF67 | ProteinID:BAT07237.1 | SEG:seg | UniParc:UPI0000F146F2 | UniProt:A0A0P0XKD0 | MapMan:35.2 |
Description
Zinc finger, C2H2-type/integrase, DNA-binding domain containing protein. (Os09t0282300-00)
Coordinates
chr9:-:6066348..6066866
Molecular Weight (calculated)
19211.4 Da
IEP (calculated)
4.449
GRAVY (calculated)
-0.644
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MANPSKDHIF PNQRSLISQS SSPHNSLPKK EEIPLLSLLP SIHDHNKIHG CYKQEKEEEV MEDVDISLQI GLPSPDPNSS VIDFAKSNPL GATATTSQEL
101: DGDDDDDHKV EVEREEEEEA ASDDLCLDYF SMGKLTKGKY WIPTPTQILI GPTHFACPVC CKTFSRYNNL QV
101: DGDDDDDHKV EVEREEEEEA ASDDLCLDYF SMGKLTKGKY WIPTPTQILI GPTHFACPVC CKTFSRYNNL QV
001: MTDPYSNFFT DWFKSNPFHH YPNSSTNPSP HPLPPVTPPS SFFFFPQSGD LRRPPPPPTP PPSPPLREAL PLLSLSPANK QQDHHHNHDH LIQEPPSTSM
101: DVDYDHHHQD DHHNLDDDDH DVTVALHIGL PSPSAQEMAS LLMMSSSSSS SRTTHHHEDM NHKKDLDHEY SHGAVGGGED DDEDSVGGDG GCRISRLNKG
201: QYWIPTPSQI LIGPTQFSCP VCFKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTGMLR LPCYCCAPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGIKP
301: FMCRKCGKAF AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHGAYGIDGF DEEDEPASEV EQLDNDHESM QSK
101: DVDYDHHHQD DHHNLDDDDH DVTVALHIGL PSPSAQEMAS LLMMSSSSSS SRTTHHHEDM NHKKDLDHEY SHGAVGGGED DDEDSVGGDG GCRISRLNKG
201: QYWIPTPSQI LIGPTQFSCP VCFKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTGMLR LPCYCCAPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGIKP
301: FMCRKCGKAF AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHGAYGIDGF DEEDEPASEV EQLDNDHESM QSK
Arabidopsis Description
WIP2WIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VLW5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.