Factsheet for Os03t0838800-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37177	Sorghum	nucleus	64.03	59.34
Zm00001d034783_P001	Maize	nucleus	57.77	57.92
TraesCS5D01G519100.1	Wheat	nucleus	62.13	55.34
TraesCS5B01G519700.1	Wheat	nucleus	60.76	53.73
TraesCS4A01G352700.1	Wheat	nucleus	58.86	51.67
Os09t0485600-01	Rice	cytosol, mitochondrion, nucleus	16.08	38.31
Os09t0282100-00	Rice	cytosol, mitochondrion, nucleus	13.9	35.42
Os12t0170400-01	Rice	nucleus	41.42	32.69
Os01t0871200-03	Rice	nucleus	46.32	32.57
Os02t0196100-01	Rice	cytosol, extracellular, nucleus	18.26	30.45
Os04t0165200-01	Rice	nucleus	29.7	29.38
Os08t0562300-01	Rice	nucleus	30.52	29.09
Os02t0572900-01	Rice	cytosol, extracellular, nucleus	30.25	28.91
Os01t0859100-01	Rice	nucleus, plastid	20.71	20.21
Os05t0444200-01	Rice	plastid	21.25	20.05
Os09t0307400-00	Rice	nucleus	20.71	19.29
Os08t0504000-01	Rice	nucleus	20.71	17.35
Os06t0612300-01	Rice	endoplasmic reticulum, vacuole	20.44	16.85
Os09t0282300-00	Rice	nucleus	5.72	12.21

Protein Annotations

EnsemblPlants:Os03t0838800-00	EnsemblPlantsGene:Os03g0838800	Gene3D:3.30.160.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR10593	PANTHER:PTHR10593:SF41	PFAM:PF00096
PFscan:PS50157	ProteinID:BAS87279.1	ScanProsite:PS00028	SEG:seg	SMART:SM00355	SUPFAM:SSF57667
UniParc:UPI000393B948	UniProt:A0A0P0W5D6	MapMan:15.5.15	:	:	:

Description

Zinc finger, C2H2 domain containing protein. (Os03t0838800-00)

Coordinates

chr3:+:35251336..35252439

Molecular Weight (calculated)

39943.7 Da

IEP (calculated)

6.663

GRAVY (calculated)

-0.486

Length

367 amino acids

Sequence
(BLAST)

001: MYLEQDEDFS QMIMELCDFD ASSTTQARHG GEAAAAAAGN ARAVLTYLTF LEQKIGHLRG IISSTPNPPP QIVAAELSCI VVQLVSISKN LAAARRGGDD
101: ADADAKHDGS SDADEGADGD GERAPPRGSY EVVQIEKEEI LAPHVHFCGV CGKGFKRDAN LRMHMRGHGE EYKSAAALAK PGGSPSRSPA AADAAARRRF
201: YSCPYVGCKR NREHKSFQPL KTPTCVKNHY RRSHCDKSFT CRRCNVKRFS VVADLRTHEK HCGRDRWVCS CGTSFSRKDK LFAHVAIFDG HSPALPPEDY
301: DDDAASGQLP HAAGEAVGRT VDTNRFFSDG LMIKGSMEDE RGSLSPMGLD YCEFDGIDLF AAAAFDF

Best Arabidopsis Sequence Match ( AT1G34370.3 )
(BLAST)

001: MKDEDDVEEG ENLPPGSYEI LQLEKEEILA PHTHFCTICG KGFKRDANLR MHMRGHGDEY KTAAALAKPN KESVPGSEPM LIKRYSCPFL GCKRNKEHKK
101: FQPLKTILCV KNHYKRTHCD KSFTCSRCHT KKFSVIADLK THEKHCGKNK WLCSCGTTFS RKDKLFGHIA LFQGHTPAIP LEETKPSAST STQRGSSEGG
201: NNNQGMVGFN LGSASNANQE TTQPGMTDGR ICFEESFSPM NFDTCNFGGF HEFPRLMFDD SESSFQMLIA NACGFSPRNV GESVSDTSL

Arabidopsis Description

STOP1Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8N5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.