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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, nucleus, cytosol

Predictor Summary:
  • nucleus 4
  • mitochondrion 2
  • cytosol 1
  • extracellular 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU85186 Sorghum nucleus 71.88 75.82
TraesCS6D01G188100.1 Wheat nucleus 70.31 73.17
TraesCS6A01G201100.1 Wheat nucleus 70.05 72.9
TraesCS6B01G227100.1 Wheat nucleus 69.79 72.24
Zm00001d016911_P001 Maize nucleus 73.44 67.46
GSMUA_Achr10P... Banana nucleus 43.75 47.86
KRG97571 Soybean nucleus, plastid 38.54 43.79
KRH59322 Soybean nucleus 36.98 43.43
KRH43171 Soybean nucleus, plastid 35.94 43.4
KRH31302 Soybean nucleus, plastid 36.98 39.01
PGSC0003DMT400008898 Potato extracellular, nucleus 36.98 38.59
Solyc04g056320.1.1 Tomato nucleus 36.98 38.07
VIT_07s0141g00020.t01 Wine grape vacuole 40.62 37.14
Os09t0282100-00 Rice cytosol, mitochondrion, nucleus 12.5 33.33
Os03t0838800-00 Rice nucleus 28.91 30.25
Os09t0485600-01 Rice cytosol, mitochondrion, nucleus 11.98 29.87
Os04t0165200-01 Rice nucleus 27.86 28.84
Os08t0562300-01 Rice nucleus 28.12 28.05
Os02t0196100-01 Rice cytosol, extracellular, nucleus 15.89 27.73
Os12t0170400-01 Rice nucleus 29.95 24.73
Os01t0871200-03 Rice nucleus 31.25 22.99
Os09t0307400-00 Rice nucleus 18.23 17.77
Os05t0444200-01 Rice plastid 17.45 17.22
Os01t0859100-01 Rice nucleus, plastid 16.67 17.02
Os08t0504000-01 Rice nucleus 17.97 15.75
Os06t0612300-01 Rice endoplasmic reticulum, vacuole 17.19 14.83
Os09t0282300-00 Rice nucleus 3.65 8.14
Protein Annotations
MapMan:15.5.15Gene3D:3.30.160.60EntrezGene:4329736ProteinID:BAD17526.1ProteinID:BAF09112.1ProteinID:BAS79358.1
GO:GO:0003674GO:GO:0003676GO:GO:0005488InterPro:IPR013087EnsemblPlantsGene:Os02g0572900EnsemblPlants:Os02t0572900-01
PFAM:PF00096ScanProsite:PS00028PFscan:PS50157PANTHER:PTHR10593PANTHER:PTHR10593:SF71UniProt:Q6YXC5
SMART:SM00355SUPFAM:SSF57667UniParc:UPI000035AF29RefSeq:XP_015627485.1RefSeq:XP_015627486.1InterPro:Znf_C2H2_sf
InterPro:Znf_C2H2_typeSEG:seg::::
Description
Zinc finger, C2H2-type domain containing protein. (Os02t0572900-01)
Coordinates
chr2:-:21956715..21960121
Molecular Weight (calculated)
40395.7 Da
IEP (calculated)
7.036
GRAVY (calculated)
-0.330
Length
384 amino acids
Sequence
(BLAST)
001: MKSTTHLLAG GGGGGSVAPP TAATAPTLAM EVGDPSGALV GGAGGAGAGG GDGDARDALL RLVALGDRMA AVRRRIAASI SGESGPLSSS DIHSVSSEIS
101: SAAHLVVLNA ASLLSSTVAS LPAPPPPPAT TVQELPPVVV SVPQEPPQEA AKGDGDYDVV ELDASELLAE HVHFCDICGK GFRRDANLRM HMRAHGDRFK
201: TLDALSRPGQ PKPPAGREVR FSCPYAGCNR NRAHRRFRPL KSAVCARNHF RRSHCPKLYA CERCGGKKRF AVLADLRSHL RHCGEEAQWR CSCGTTFSRK
301: DKLFGHLALF EGHTPAIAEP NKGVATAAAE ASISMMEEGG VEANCDREED EEGGFDPKFF QEWMEELRGG AVAPNWSAPS EAGH
Best Arabidopsis Sequence Match ( AT1G34370.1 )
(BLAST)
001: METEDDLCNT NWGSSSSKSR EPGSSDCGNS TFAGFTSQQK WEDASILDYE MGVEPGLQES IQANVDFLQG VRAQAWDPRT MLSNLSFMEQ KIHQLQDLVH
101: LLVGRGGQLQ GRQDELAAQQ QQLITTDLTS IIIQLISTAG SLLPSVKHNM STAPGPFTGQ PGSAVFPYVR EANNVASQSQ NNNNCGAREF DLPKPVLVDE
201: REGHVVEEHE MKDEDDVEEG ENLPPGSYEI LQLEKEEILA PHTHFCTICG KGFKRDANLR MHMRGHGDEY KTAAALAKPN KESVPGSEPM LIKRYSCPFL
301: GCKRNKEHKK FQPLKTILCV KNHYKRTHCD KSFTCSRCHT KKFSVIADLK THEKHCGKNK WLCSCGTTFS RKDKLFGHIA LFQGHTPAIP LEETKPSAST
401: STQRGSSEGG NNNQGMVGFN LGSASNANQE TTQPGMTDGR ICFEESFSPM NFDTCNFGGF HEFPRLMFDD SESSFQMLIA NACGFSPRNV GESVSDTSL
Arabidopsis Description
STOP1Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8N5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.