CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, plastid

Predictor Summary:

nucleus 4
plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97571	Soybean	nucleus, plastid	81.59	87.87
KRH43171	Soybean	nucleus, plastid	45.88	52.52
KRH59322	Soybean	nucleus	45.6	50.76
PGSC0003DMT400008898	Potato	extracellular, nucleus	47.25	46.74
Solyc04g056320.1.1	Tomato	nucleus	47.25	46.11
VIT_07s0141g00020.t01	Wine grape	vacuole	50.0	43.33
GSMUA_Achr10P...	Banana	nucleus	41.76	43.3
OQU85186	Sorghum	nucleus	39.84	39.84
TraesCS6D01G188100.1	Wheat	nucleus	39.84	39.3
TraesCS6A01G201100.1	Wheat	nucleus	39.56	39.02
TraesCS6B01G227100.1	Wheat	nucleus	39.56	38.81
Os02t0572900-01	Rice	cytosol, extracellular, nucleus	39.01	36.98
KRH22822	Soybean	plastid	28.02	36.69
Zm00001d016911_P001	Maize	nucleus	40.11	34.93
KRH25207	Soybean	nucleus	13.74	33.78
KRH26538	Soybean	nucleus, plastid	31.87	28.29
KRH25115	Soybean	nucleus	30.49	28.03
KRH30553	Soybean	nucleus, plastid	31.04	27.56
KRH18924	Soybean	nucleus	17.31	26.58
KRH08551	Soybean	nucleus, plastid	36.54	25.53
KRH16750	Soybean	nucleus	17.31	25.3
KRH34957	Soybean	nucleus, plastid	34.89	25.05
KRG91822	Soybean	nucleus, plastid	34.62	24.75
KRH34760	Soybean	nucleus	17.03	22.71
KRG92027	Soybean	nucleus	16.76	22.26
KRH22690	Soybean	nucleus	19.51	22.26
KRH26622	Soybean	nucleus	19.51	22.12
KRH75477	Soybean	nucleus	19.23	21.08
KRH70598	Soybean	nucleus	19.23	20.96
KRH13927	Soybean	nucleus, plastid	19.23	20.47
KRH43510	Soybean	nucleus, plastid	19.23	20.23
KRH24697	Soybean	nucleus, plastid	18.68	19.94
KRH29701	Soybean	nucleus	18.68	19.94
KRH27491	Soybean	nucleus, plastid	18.96	19.6
KRH23146	Soybean	nucleus, plastid	18.68	19.43
KRH10191	Soybean	nucleus, plastid	18.41	19.42
KRH30442	Soybean	nucleus	17.58	19.39
KRH20837	Soybean	nucleus, plastid	18.96	19.33
KRG95308	Soybean	nucleus, plastid	18.41	19.2
KRH71956	Soybean	nucleus, plastid	18.96	18.6
KRH66988	Soybean	nucleus	18.13	18.44
KRH33045	Soybean	nucleus, plastid	18.68	17.62
KRH25208	Soybean	nucleus, plastid	4.12	8.57

Protein Annotations

EntrezGene:100809135	MapMan:15.5.15	Gene3D:3.30.160.60	EMBL:ACUP02007137	EnsemblPlantsGene:GLYMA_11G240600	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	InterPro:IPR013087	UniProt:K7LS56	EnsemblPlants:KRH31302	ProteinID:KRH31302
ProteinID:KRH31302.1	ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR10593	PANTHER:PTHR10593:SF71	SMART:SM00355
SUPFAM:SSF57667	UniParc:UPI0001E234E2	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg	:

Description

hypothetical protein

Coordinates

chr11:+:33491895..33493311

Molecular Weight (calculated)

40635.7 Da

IEP (calculated)

6.078

GRAVY (calculated)

-0.594

Length

364 amino acids

Sequence
(BLAST)

001: MSNSNSNPTR ILHSQSQDPN TTTADPHVLL QNLSLVRTRM DSLQHFLSQS INTNTPLAVD QIAMVSSQIV SSIHQLIVNG SALVSYSQNS TAASGAPDPP
101: LYPKKPEPEP SVADKAKQIL DSKFGPLEDD DDDDGGAEDF DDGSGIVELD AIEILAEHMH FCEICAKGFR RDSNLRMHMR AHGEQFKTVE ALAKPSETTA
201: QRRATRFSCP FEGCNRNKLH RRFRPLKSVI CVKNHFKRSH CPKMYTCERC RKKHFSVLSD LRSHAKHCGG EARWKCTCGT TFSRKDKLFG HIALFDGHAP
301: ALACDEEGKG KQVVEDDEDP MLMNESEFES DNCLLNQELP EGFFDDFGSI DDYCLKEVLG FPSN

Best Arabidopsis Sequence Match ( AT1G34370.2 )
(BLAST)

001: METEDDLCNT NWGSSSSKSR EPGSSDCGNS TFAGFTSQQK WEDASILDYE MGVEPGLQES IQANVDFLQG VRAQAWDPRT MLSNLSFMEQ KIHQLQDLVH
101: LLVGRGGQLQ GRQDELAAQQ QQLITTDLTS IIIQLISTAG SLLPSVKHNM STAPGPFTGQ PGSAVFPYVR EANNVASQSQ NNNNCGAREF DLPKPVLVDE
201: REGHVVEEHE MKDEDDVEEG ENLPPGSYEI LQLEKEEILA PHTHFCTICG KGFKRDANLR MHMRGHGDEY KTAAALAKPN KESVPGSEPM LIKRYSCPFL
301: GCKRNKEHKK FQPLKTILCV KNHYKRTHCD KSFTCSRCHT KKFSVIADLK THEKHCGKNK WLCSCGTTFS RKDKLFGHIA LFQGHTPAIP LEETKPSAST
401: STQRGSSEGG NNNQGMVGFN LGSASNANQE TTQPGMTDGR ICFEESFSPM NFDTCNFGGF HEFPRLMFDD SESSFQMLIA NACGFSPRNV GESVSDTSL

Arabidopsis Description

STOP1Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8N5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.