Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU85186 | Sorghum | nucleus | 81.1 | 93.13 |
| Os02t0572900-01 | Rice | cytosol, extracellular, nucleus | 67.46 | 73.44 |
| TraesCS6A01G201100.1 | Wheat | nucleus | 63.88 | 72.36 |
| TraesCS6D01G188100.1 | Wheat | nucleus | 63.88 | 72.36 |
| TraesCS6B01G227100.1 | Wheat | nucleus | 63.4 | 71.43 |
| GSMUA_Achr10P... | Banana | nucleus | 40.91 | 48.72 |
| KRG97571 | Soybean | nucleus, plastid | 36.12 | 44.67 |
| KRH59322 | Soybean | nucleus | 34.21 | 43.73 |
| KRH43171 | Soybean | nucleus, plastid | 32.54 | 42.77 |
| KRH31302 | Soybean | nucleus, plastid | 34.93 | 40.11 |
| PGSC0003DMT400008898 | Potato | extracellular, nucleus | 34.45 | 39.13 |
| Solyc04g056320.1.1 | Tomato | nucleus | 33.73 | 37.8 |
| VIT_07s0141g00020.t01 | Wine grape | vacuole | 34.93 | 34.76 |
| Zm00001d034783_P001 | Maize | nucleus | 26.32 | 30.05 |
| Zm00001d031895_P001 | Maize | nucleus | 25.6 | 25.54 |
| Zm00001d023558_P001 | Maize | nucleus | 28.47 | 25.48 |
| Zm00001d012260_P001 | Maize | nucleus | 28.95 | 23.31 |
| Zm00001d042686_P001 | Maize | nucleus | 28.23 | 22.78 |
| Zm00001d020037_P001 | Maize | nucleus | 17.22 | 19.15 |
| Zm00001d005566_P001 | Maize | nucleus | 16.75 | 18.47 |
| Zm00001d036812_P001 | Maize | nucleus | 16.27 | 17.48 |
| Zm00001d038297_P001 | Maize | nucleus | 16.03 | 17.09 |
| Zm00001d031416_P001 | Maize | nucleus | 17.22 | 17.02 |
| Zm00001d046774_P001 | Maize | nucleus | 16.03 | 16.83 |
| Zm00001d052883_P001 | Maize | nucleus | 16.51 | 16.63 |
| Zm00001d010131_P001 | Maize | nucleus, plastid | 15.55 | 16.5 |
| Zm00001d042781_P001 | Maize | nucleus | 14.83 | 15.35 |
| Zm00001d020923_P001 | Maize | nucleus | 16.03 | 15.26 |
Protein Annotations
| EnsemblPlants:Zm00001d016911_P001 | EnsemblPlants:Zm00001d016911_T001 | EnsemblPlantsGene:Zm00001d016911 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF71 |
| PFscan:PS50157 | ProteinID:AQK71926.1 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 |
| UniParc:UPI000843408D | UniProt:A0A1D6HB46 | MapMan:15.5.15 | : | : | : |
Description
C2H2-transcription factor 23C2H2 and C2HC zinc fingers superfamily protein
Coordinates
chr5:-:179711450..179716881
Molecular Weight (calculated)
44603.7 Da
IEP (calculated)
7.794
GRAVY (calculated)
-0.425
Length
418 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAKGNNLST AAPKRVVSCK SNFDTTRCLV MDSTRSNQVA GRCNSTIASR AATVPPSLTM PRGELADAIV GGGGGGGADG DPRAALLRLS ALGDRMAAVR
101: GRICASISGE ARPLSYADIQ SVSSEISAAA QLVVLNAAEL LASSVPFPAP PPPPPSAAPS PAPVREIPVV AASAQEQPLE AAKDDGGYEV VELDAAELLA
201: EHVHFCEICG KGFRRDANLR MHMRAHGDRF KTLDALSRPG HGQPKPPVGS NVRFSCPFAG CNRNRTHRRF RPLKSAVCAR NHFRRSHCPK LYACERCGGK
301: KRFAVLADLR SHLRHCGEEA QWRCSCGTTF SRKDKLFGHL ALFEGHTPAV TKPNKDVVTG PTESTIDAME EGGFEEGIPD REEDEEGGYD PEFFKEWMDE
401: LRGGAGGSNW PGPAADGH
101: GRICASISGE ARPLSYADIQ SVSSEISAAA QLVVLNAAEL LASSVPFPAP PPPPPSAAPS PAPVREIPVV AASAQEQPLE AAKDDGGYEV VELDAAELLA
201: EHVHFCEICG KGFRRDANLR MHMRAHGDRF KTLDALSRPG HGQPKPPVGS NVRFSCPFAG CNRNRTHRRF RPLKSAVCAR NHFRRSHCPK LYACERCGGK
301: KRFAVLADLR SHLRHCGEEA QWRCSCGTTF SRKDKLFGHL ALFEGHTPAV TKPNKDVVTG PTESTIDAME EGGFEEGIPD REEDEEGGYD PEFFKEWMDE
401: LRGGAGGSNW PGPAADGH
001: METEDDLCNT NWGSSSSKSR EPGSSDCGNS TFAGFTSQQK WEDASILDYE MGVEPGLQES IQANVDFLQG VRAQAWDPRT MLSNLSFMEQ KIHQLQDLVH
101: LLVGRGGQLQ GRQDELAAQQ QQLITTDLTS IIIQLISTAG SLLPSVKHNM STAPGPFTGQ PGSAVFPYVR EANNVASQSQ NNNNCGAREF DLPKPVLVDE
201: REGHVVEEHE MKDEDDVEEG ENLPPGSYEI LQLEKEEILA PHTHFCTICG KGFKRDANLR MHMRGHGDEY KTAAALAKPN KESVPGSEPM LIKRYSCPFL
301: GCKRNKEHKK FQPLKTILCV KNHYKRTHCD KSFTCSRCHT KKFSVIADLK THEKHCGKNK WLCSCGTTFS RKDKLFGHIA LFQGHTPAIP LEETKPSAST
401: STQRGSSEGG NNNQGMVGFN LGSASNANQE TTQPGMTDGR ICFEESFSPM NFDTCNFGGF HEFPRLMFDD SESSFQMLIA NACGFSPRNV GESVSDTSL
101: LLVGRGGQLQ GRQDELAAQQ QQLITTDLTS IIIQLISTAG SLLPSVKHNM STAPGPFTGQ PGSAVFPYVR EANNVASQSQ NNNNCGAREF DLPKPVLVDE
201: REGHVVEEHE MKDEDDVEEG ENLPPGSYEI LQLEKEEILA PHTHFCTICG KGFKRDANLR MHMRGHGDEY KTAAALAKPN KESVPGSEPM LIKRYSCPFL
301: GCKRNKEHKK FQPLKTILCV KNHYKRTHCD KSFTCSRCHT KKFSVIADLK THEKHCGKNK WLCSCGTTFS RKDKLFGHIA LFQGHTPAIP LEETKPSAST
401: STQRGSSEGG NNNQGMVGFN LGSASNANQE TTQPGMTDGR ICFEESFSPM NFDTCNFGGF HEFPRLMFDD SESSFQMLIA NACGFSPRNV GESVSDTSL
Arabidopsis Description
STOP1Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8N5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.