Factsheet for Zm00001d023558_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0170400-01	Rice	nucleus	56.53	56.77
TraesCS3D01G054300.1	Wheat	nucleus	30.19	52.42
Zm00001d012260_P001	Maize	nucleus	45.4	40.85
Zm00001d042686_P001	Maize	nucleus	44.97	40.54
Zm00001d034783_P001	Maize	nucleus	29.55	37.7
Zm00001d031895_P001	Maize	nucleus	25.7	28.64
Zm00001d016911_P001	Maize	nucleus	25.48	28.47
Zm00001d020037_P001	Maize	nucleus	15.85	19.68
Zm00001d038297_P001	Maize	nucleus	16.06	19.13
Zm00001d042781_P001	Maize	nucleus	16.49	19.06
Zm00001d010131_P001	Maize	nucleus, plastid	16.06	19.04
Zm00001d036812_P001	Maize	nucleus	15.42	18.51
Zm00001d046774_P001	Maize	nucleus	15.63	18.34
Zm00001d052883_P001	Maize	nucleus	16.27	18.31
Zm00001d005566_P001	Maize	nucleus	14.78	18.21
Zm00001d031416_P001	Maize	nucleus	16.49	18.2
Zm00001d020923_P001	Maize	nucleus	16.7	17.77

Protein Annotations

EntrezGene:100282635	MapMan:15.5.15	Gene3D:3.30.160.60	ProteinID:AQK39563.1	UniProt:B6T9Q0	EMBL:EU961715
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0010044	GO:GO:0043620	GO:GO:0045893	InterPro:IPR013087	EMBL:KJ728010
ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR10593	PANTHER:PTHR10593:SF71	SMART:SM00355	SUPFAM:SSF57667
UniParc:UPI000182C643	EnsemblPlantsGene:Zm00001d023558	EnsemblPlants:Zm00001d023558_P001	EnsemblPlants:Zm00001d023558_T001	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type
SEG:seg	:	:	:	:	:

Description

C2H2-transcription factor 235Protein SENSITIVE TO PROTON RHIZOTOXICITY 1

Coordinates

chr10:-:10165237..10166640

Molecular Weight (calculated)

51055.9 Da

IEP (calculated)

6.942

GRAVY (calculated)

-0.569

Length

467 amino acids

Sequence
(BLAST)

001: MDNHIHSQPA ANLYYQFGMG TEQQYPPPFA SPPSTNIPHM DWNPATMLDN LTFIEEKIQQ VKDVIRTMVD NAGQVQVQCH HQAGELLAQK QKQQVVNADL
101: TCLIVQLIST AGSLLPSLKN SSFLSHPHPA GHVDMANHVG PSSSLVPNAM TVSEDYEELF KGWTDGGIEV DDDGVLVEEQ EITKDGDSLS YELLQLEEDE
201: ILAPHTHFCT ICGKGFKRDA NLRMHMRGHG DEYKSPAALA KPPRDPGAEQ EPAKRRYSCP FAGCKRNKLH KSFQPLKTIL CVKNHYRRSH CEKSHTCGRC
301: HAKKFSIVAD LRTHEKHCGR RDRWVCSCGT SFSRKDKLFA HVALFQGHTP ALSSPLEEEP PKACSDQHQT GRAGSRREPA KVPAGSVGGG SGSSFVWGAS
401: SSGENSALDI KGFVDGCSGD FLSTANFGSF NLSFGPADGF TGEPSSGGSF SMLPPEHFQS AQKKGQN

Best Arabidopsis Sequence Match ( AT1G34370.2 )
(BLAST)

001: METEDDLCNT NWGSSSSKSR EPGSSDCGNS TFAGFTSQQK WEDASILDYE MGVEPGLQES IQANVDFLQG VRAQAWDPRT MLSNLSFMEQ KIHQLQDLVH
101: LLVGRGGQLQ GRQDELAAQQ QQLITTDLTS IIIQLISTAG SLLPSVKHNM STAPGPFTGQ PGSAVFPYVR EANNVASQSQ NNNNCGAREF DLPKPVLVDE
201: REGHVVEEHE MKDEDDVEEG ENLPPGSYEI LQLEKEEILA PHTHFCTICG KGFKRDANLR MHMRGHGDEY KTAAALAKPN KESVPGSEPM LIKRYSCPFL
301: GCKRNKEHKK FQPLKTILCV KNHYKRTHCD KSFTCSRCHT KKFSVIADLK THEKHCGKNK WLCSCGTTFS RKDKLFGHIA LFQGHTPAIP LEETKPSAST
401: STQRGSSEGG NNNQGMVGFN LGSASNANQE TTQPGMTDGR ICFEESFSPM NFDTCNFGGF HEFPRLMFDD SESSFQMLIA NACGFSPRNV GESVSDTSL

Arabidopsis Description

STOP1Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8N5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.