Factsheet for Zm00001d046774_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
mitochondrion 2
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88644	Sorghum	nucleus, plastid	85.18	83.91
Zm00001d036812_P001	Maize	nucleus	81.66	83.55
PGSC0003DMT400017556	Potato	nucleus	28.14	78.32
TraesCS7A01G404400.1	Wheat	nucleus	67.59	73.1
TraesCS7B01G304000.1	Wheat	nucleus	67.84	72.97
TraesCS7D01G397800.1	Wheat	nucleus	67.34	72.43
CDY57608	Canola	nucleus	40.95	67.92
Bra003295.1-P	Field mustard	nucleus	41.46	67.07
CDX67704	Canola	nucleus	41.46	67.07
Solyc11g062060.1.1	Tomato	nucleus	42.21	64.37
Solyc01g087050.2.1	Tomato	nucleus	45.98	61.41
VIT_08s0007g08070.t01	Wine grape	nucleus	52.26	60.29
VIT_06s0004g01870.t01	Wine grape	nucleus	50.25	59.88
Bra007346.1-P	Field mustard	nucleus	45.73	59.28
PGSC0003DMT400077822	Potato	nucleus	46.98	58.8
KRG95308	Soybean	nucleus, plastid	51.01	58.17
Os06t0612300-01	Rice	endoplasmic reticulum, vacuole	64.82	57.98
GSMUA_Achr3P11870_001	Banana	nucleus	49.5	57.94
KRH66988	Soybean	nucleus	51.26	56.98
CDX88959	Canola	nucleus	52.01	56.87
Bra014612.1-P	Field mustard	nucleus, plastid	52.01	56.87
PGSC0003DMT400035408	Potato	nucleus	48.99	56.2
CDX72006	Canola	nucleus	52.51	56.03
CDY06083	Canola	nucleus	52.51	55.88
KRH10191	Soybean	nucleus, plastid	47.99	55.36
KRH24697	Soybean	nucleus, plastid	47.24	55.13
KRH29701	Soybean	nucleus	46.98	54.84
VIT_13s0064g01060.t01	Wine grape	nucleus	47.24	54.81
KRH23146	Soybean	nucleus, plastid	47.99	54.57
AT3G57670.1	Thale cress	nucleus	52.51	54.57
KRH71956	Soybean	nucleus, plastid	50.75	54.45
AT1G51220.1	Thale cress	nucleus	45.23	53.41
CDY06390	Canola	nucleus	44.22	52.69
KRH33045	Soybean	nucleus, plastid	50.5	52.07
CDY22834	Canola	nucleus, plastid	44.22	52.07
CDY25224	Canola	nucleus	43.97	51.78
Bra030450.1-P	Field mustard	nucleus	44.22	51.76
KRH27491	Soybean	nucleus, plastid	45.73	51.7
KRH20837	Soybean	nucleus, plastid	46.23	51.54
CDY29624	Canola	nucleus	43.97	51.47
Bra018902.1-P	Field mustard	plastid	43.22	51.04
CDY35565	Canola	nucleus	43.47	51.03
KRH43510	Soybean	nucleus, plastid	43.97	50.58
CDY57920	Canola	nucleus	45.23	50.14
Bra023918.1-P	Field mustard	nucleus	45.23	50.14
CDY27556	Canola	nucleus	44.97	50.0
Bra031239.1-P	Field mustard	nucleus	44.72	49.58
KRH13927	Soybean	nucleus, plastid	42.21	49.12
Zm00001d052883_P001	Maize	nucleus	47.74	45.78
Zm00001d020923_P001	Maize	nucleus	50.25	45.56
Zm00001d031416_P001	Maize	nucleus	47.74	44.92
Solyc03g059270.2.1	Tomato	nucleus	37.69	43.86
AT3G20880.1	Thale cress	nucleus	44.72	43.2
Zm00001d038297_P001	Maize	nucleus	39.45	40.05
Zm00001d042781_P001	Maize	nucleus	38.94	38.37
Zm00001d010131_P001	Maize	nucleus, plastid	37.69	38.07
Zm00001d005566_P001	Maize	nucleus	35.93	37.73
Zm00001d020037_P001	Maize	nucleus	34.67	36.7
Zm00001d034783_P001	Maize	nucleus	18.09	19.67
Zm00001d031895_P001	Maize	nucleus	17.84	16.95
Zm00001d016911_P001	Maize	nucleus	16.83	16.03
Zm00001d023558_P001	Maize	nucleus	18.34	15.63
Zm00001d042686_P001	Maize	nucleus	18.34	14.09
Zm00001d012260_P001	Maize	nucleus	18.09	13.87

Protein Annotations

EnsemblPlants:Zm00001d046774_P001	EnsemblPlants:Zm00001d046774_T001	EnsemblPlantsGene:Zm00001d046774	EntrezGene:103638807	Gene3D:3.30.160.60	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR10593
PANTHER:PTHR10593:SF61	PFscan:PS50157	ProteinID:AQL05003.1	ScanProsite:PS00028	SEG:seg	SMART:SM00355
SUPFAM:SSF57667	UniParc:UPI000220E518	UniProt:K7UPT7	MapMan:15.5.15	:	:

Description

Zinc finger protein WIP2

Coordinates

chr9:-:105254741..105258055

Molecular Weight (calculated)

43403.3 Da

IEP (calculated)

7.881

GRAVY (calculated)

-0.832

Length

398 amino acids

Sequence
(BLAST)

001: MGDPYSNFLR GHYSHLPPSN APPATSFPSS YASSYYLHHP PPHSPPIREA LPLLSNLTPS SATNHNHGGG DVRDHKDGNK RATSRSNQEE ADQAAAGEVT
101: VALHIGLPSP GSGPSPSESA ADGGDSQEPS AEGRSQQHQG VDHEAGEEEE AEEEDAMTVG CASIGIGRLT KGQYWIPTPS QILIGPTQFS CPVCYKTFNR
201: YNNMQMHMWG HGSQYRKGPE SLRGTQPTAM LRLPCYCCAA GCRNNIDHPR ARPLKDFRTL QTHYRRKHGI KPFMCRKCGK AFAVRGDWRT HEKNCGKLWY
301: CACGSDFKHK RSLKDHIRAF GRGHAACGID CFDDLDDDDR DPSSEVDHAA TTNATSMTTT AAAAAANAHR RHHSVWKPPP PPPPPLSSSS RGSGDRLL

Best Arabidopsis Sequence Match ( AT3G57670.1 )
(BLAST)

001: MTDPYSNFFT DWFKSNPFHH YPNSSTNPSP HPLPPVTPPS SFFFFPQSGD LRRPPPPPTP PPSPPLREAL PLLSLSPANK QQDHHHNHDH LIQEPPSTSM
101: DVDYDHHHQD DHHNLDDDDH DVTVALHIGL PSPSAQEMAS LLMMSSSSSS SRTTHHHEDM NHKKDLDHEY SHGAVGGGED DDEDSVGGDG GCRISRLNKG
201: QYWIPTPSQI LIGPTQFSCP VCFKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTGMLR LPCYCCAPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGIKP
301: FMCRKCGKAF AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHGAYGIDGF DEEDEPASEV EQLDNDHESM QSK

Arabidopsis Description

WIP2WIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VLW5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.