Subcellular Localization
min:
: max
Winner_takes_all: nucleus, plastid
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH20837 | Soybean | nucleus, plastid | 96.02 | 94.68 |
| PGSC0003DMT400017556 | Potato | nucleus | 33.81 | 83.22 |
| KRH25207 | Soybean | nucleus | 30.11 | 71.62 |
| KRH43510 | Soybean | nucleus, plastid | 63.35 | 64.45 |
| KRH13927 | Soybean | nucleus, plastid | 61.93 | 63.74 |
| Solyc01g087050.2.1 | Tomato | nucleus | 53.41 | 63.09 |
| VIT_13s0064g01060.t01 | Wine grape | nucleus | 57.39 | 58.89 |
| KRH18924 | Soybean | nucleus | 39.49 | 58.65 |
| KRH16750 | Soybean | nucleus | 39.49 | 55.82 |
| KRH10191 | Soybean | nucleus, plastid | 54.26 | 55.36 |
| KRG95308 | Soybean | nucleus, plastid | 53.98 | 54.44 |
| KRH23146 | Soybean | nucleus, plastid | 53.41 | 53.71 |
| KRH66988 | Soybean | nucleus | 53.69 | 52.79 |
| KRH24697 | Soybean | nucleus, plastid | 51.14 | 52.79 |
| KRH29701 | Soybean | nucleus | 50.57 | 52.2 |
| KRH71956 | Soybean | nucleus, plastid | 54.83 | 52.02 |
| GSMUA_Achr4P06350_001 | Banana | nucleus | 44.6 | 50.65 |
| KRH33045 | Soybean | nucleus, plastid | 55.11 | 50.26 |
| KRH34760 | Soybean | nucleus | 38.92 | 50.18 |
| KRG92027 | Soybean | nucleus | 38.64 | 49.63 |
| TraesCS7A01G404400.1 | Wheat | nucleus | 51.7 | 49.46 |
| TraesCS7D01G397800.1 | Wheat | nucleus | 51.7 | 49.19 |
| TraesCS7B01G304000.1 | Wheat | nucleus | 51.7 | 49.19 |
| GSMUA_Achr9P22340_001 | Banana | nucleus | 50.85 | 49.04 |
| KRH26622 | Soybean | nucleus | 44.03 | 48.29 |
| KRH22690 | Soybean | nucleus | 43.75 | 48.28 |
| KRH30442 | Soybean | nucleus | 44.32 | 47.27 |
| Zm00001d036812_P001 | Maize | nucleus | 51.7 | 46.79 |
| EER88644 | Sorghum | nucleus, plastid | 52.84 | 46.04 |
| Zm00001d046774_P001 | Maize | nucleus | 51.7 | 45.73 |
| KRH70598 | Soybean | nucleus | 40.34 | 42.52 |
| KRH75477 | Soybean | nucleus | 39.77 | 42.17 |
| Os06t0612300-01 | Rice | endoplasmic reticulum, vacuole | 53.12 | 42.02 |
| KRH25208 | Soybean | nucleus, plastid | 14.2 | 28.57 |
| KRH22822 | Soybean | plastid | 16.76 | 21.22 |
| KRG97571 | Soybean | nucleus, plastid | 19.32 | 20.12 |
| KRH59322 | Soybean | nucleus | 18.47 | 19.88 |
| KRH43171 | Soybean | nucleus, plastid | 17.9 | 19.81 |
| KRH31302 | Soybean | nucleus, plastid | 19.6 | 18.96 |
| KRH30553 | Soybean | nucleus, plastid | 20.17 | 17.32 |
| KRH25115 | Soybean | nucleus | 19.32 | 17.17 |
| KRH26538 | Soybean | nucleus, plastid | 19.03 | 16.34 |
| KRH34957 | Soybean | nucleus, plastid | 23.01 | 15.98 |
| KRH08551 | Soybean | nucleus, plastid | 23.58 | 15.93 |
| KRG91822 | Soybean | nucleus, plastid | 22.16 | 15.32 |
Protein Annotations
| EntrezGene:100794446 | MapMan:15.5.15 | Gene3D:3.30.160.60 | EMBL:ACUP02007810 | EnsemblPlantsGene:GLYMA_12G237800 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 | UniProt:K7LWM6 | ProteinID:KRH27490.1 | EnsemblPlants:KRH27491 |
| ProteinID:KRH27491 | ProteinID:KRH27491.1 | PFAM:PF13912 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 |
| PANTHER:PTHR10593:SF72 | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000233D017 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr12:+:39710473..39714021
Molecular Weight (calculated)
39834.8 Da
IEP (calculated)
7.729
GRAVY (calculated)
-0.823
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MTDPQSNLFH EWFNFMLLHP HYSSSQSNYP FANNYSNNNR FGIQLQQGAA SSSSSSFYAA PPSSPPLREA LPLINKISLK SSEQHQQNEP SSNVVEEKEE
101: DKNKVDNNKH HESGEDGDEE TVTVALHIGL PRMDTSSSDL GPSRVVSTTC MEISEKEEVN MISKHPLDNR LNKGQYWIPT PSQILIGPTQ FPCPVCSKTF
201: NRYNNLQMHM WGHGSQYRKG PDSLKGTQPT AMLRLPCFCC APGCKHNIDH PRARPLKDFR TLQTHYKRKH GIKPYMCRKC GKAFAVKGDW RTHEKNCGKI
301: WYCLCGSDFK HKRSLKDHIK AFGFGHGSFG IDCLQEEDEA ASDIEHDGES SM
101: DKNKVDNNKH HESGEDGDEE TVTVALHIGL PRMDTSSSDL GPSRVVSTTC MEISEKEEVN MISKHPLDNR LNKGQYWIPT PSQILIGPTQ FPCPVCSKTF
201: NRYNNLQMHM WGHGSQYRKG PDSLKGTQPT AMLRLPCFCC APGCKHNIDH PRARPLKDFR TLQTHYKRKH GIKPYMCRKC GKAFAVKGDW RTHEKNCGKI
301: WYCLCGSDFK HKRSLKDHIK AFGFGHGSFG IDCLQEEDEA ASDIEHDGES SM
001: MTDPYSNFFT DWFKSNPFHH YPNSSTNPSP HPLPPVTPPS SFFFFPQSGD LRRPPPPPTP PPSPPLREAL PLLSLSPANK QQDHHHNHDH LIQEPPSTSM
101: DVDYDHHHQD DHHNLDDDDH DVTVALHIGL PSPSAQEMAS LLMMSSSSSS SRTTHHHEDM NHKKDLDHEY SHGAVGGGED DDEDSVGGDG GCRISRLNKG
201: QYWIPTPSQI LIGPTQFSCP VCFKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTGMLR LPCYCCAPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGIKP
301: FMCRKCGKAF AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHGAYGIDGF DEEDEPASEV EQLDNDHESM QSK
101: DVDYDHHHQD DHHNLDDDDH DVTVALHIGL PSPSAQEMAS LLMMSSSSSS SRTTHHHEDM NHKKDLDHEY SHGAVGGGED DDEDSVGGDG GCRISRLNKG
201: QYWIPTPSQI LIGPTQFSCP VCFKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTGMLR LPCYCCAPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGIKP
301: FMCRKCGKAF AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHGAYGIDGF DEEDEPASEV EQLDNDHESM QSK
Arabidopsis Description
WIP2WIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VLW5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.