CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30553	Soybean	nucleus, plastid	85.61	82.68
KRH22822	Soybean	plastid	44.19	62.95
KRH26538	Soybean	nucleus, plastid	57.32	55.37
GSMUA_Achr1P15330_001	Banana	cytosol	37.88	53.38
GSMUA_Achr11P...	Banana	nucleus	39.39	45.88
KRH25207	Soybean	nucleus	12.63	33.78
KRG97571	Soybean	nucleus, plastid	28.79	33.73
KRH59322	Soybean	nucleus	27.53	33.33
KRH43171	Soybean	nucleus, plastid	26.77	33.33
KRH31302	Soybean	nucleus, plastid	28.03	30.49
KRH18924	Soybean	nucleus	15.91	26.58
KRH16750	Soybean	nucleus	16.67	26.51
KRH34957	Soybean	nucleus, plastid	33.33	26.04
KRG91822	Soybean	nucleus, plastid	33.08	25.74
KRH08551	Soybean	nucleus, plastid	32.83	24.95
KRG92027	Soybean	nucleus	16.92	24.45
KRH34760	Soybean	nucleus	16.41	23.81
KRH29701	Soybean	nucleus	18.94	21.99
KRH75477	Soybean	nucleus	18.43	21.99
KRH24697	Soybean	nucleus, plastid	18.69	21.7
KRH10191	Soybean	nucleus, plastid	18.69	21.45
KRH22690	Soybean	nucleus	17.17	21.32
KRH70598	Soybean	nucleus	17.93	21.26
KRH30442	Soybean	nucleus	17.68	21.21
KRG95308	Soybean	nucleus, plastid	18.69	21.2
KRH26622	Soybean	nucleus	17.17	21.18
KRH66988	Soybean	nucleus	18.94	20.95
KRH23146	Soybean	nucleus, plastid	18.43	20.86
KRH71956	Soybean	nucleus, plastid	18.94	20.22
KRH33045	Soybean	nucleus, plastid	19.44	19.95
KRH20837	Soybean	nucleus, plastid	17.68	19.61
KRH13927	Soybean	nucleus, plastid	16.92	19.59
KRH43510	Soybean	nucleus, plastid	16.92	19.36
KRH27491	Soybean	nucleus, plastid	17.17	19.32
KRH25208	Soybean	nucleus, plastid	5.3	12.0

Protein Annotations

EMBL:ACUP02007206	EnsemblPlants:KRH25115	EnsemblPlantsGene:GLYMA_12G081700	EntrezGene:100803120	Gene3D:3.30.160.60	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR10593
PANTHER:PTHR10593:SF41	PFscan:PS50157	ProteinID:KRH25115	ProteinID:KRH25115.1	ScanProsite:PS00028	SEG:seg
SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI000233C2E4	UniProt:A0A0R0HDM7	MapMan:15.5.15	:

Description

hypothetical protein

Coordinates

chr12:+:6461033..6463121

Molecular Weight (calculated)

44064.2 Da

IEP (calculated)

7.689

GRAVY (calculated)

-0.492

Length

396 amino acids

Sequence
(BLAST)

001: MMPINEATIS SSTNDFQELH MFPVAMNEYL VSPSLEASSS SASHSSNSLL FHLLLLKDKL GQLQNLVDVL VSPQQNLPES TPTAISTINN AIQEIIMAAT
101: SMRFTCQQMI PSSSSGTNTT NELQQKQIDH GRLLPPHHES NFVHNNRGVA SNNINIVSDI NRGQSFLLSS SIEGEALDWF AESYNNNRNS GNYCNPKDDE
201: AANIISNIMG EMSDIIELDA ADLLAKYSYF CQVCGKGFKR DANLRMHMRA HGEEYKTSSA LCNPMKNNKE NSNLLLLGAE EGSGATKRYS CPQQGCRWNQ
301: RHAKFQPLKS MICAKNHYKR SHCPKMYVCN RCNQKHFSVI SDLRTHEKHC GDPKWLCSCG TTFSRKDKLM GHVALFVGHT PVTSGLSSYS GKSEQL

Best Arabidopsis Sequence Match ( AT5G22890.1 )
(BLAST)

001: MHIHMMNRDE HIAKKVEGSI SSFSGETSTS SKQIYVNPVT TTGTKSMEDD DVSLSLLYNL STLHEKVHQI QSLVSFYMVS TNNINQSSGS TSLAVANIGS
101: LVQEIITAAS SMLYTCQQLQ IGSNNNNNDI DNDQTVDAMV LEFSRQETDP GHDFVQESTN LFGVQERGQI SFPDQNLDWY NTETINPKKD KHRSKPSSGS
201: YDILELDVAD LLAKYTHYCQ ICGKGFKRDA NLRMHMRAHG DEYKTREALI SPTSQDKKGG YSLKKHYYSC PQHGCRWNQR HEKFQPLKSV ICAKNHYKRS
301: HCPKMYMCRR CSVKHFSVLS DLRTHEKHCG DIKWVCSCGT KFSRKDKLMS HVSLFLGHVP AHGSSKPPTI TLK

Arabidopsis Description

STOP2Protein SENSITIVE TO PROTON RHIZOTOXICITY 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WT24]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.