CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 5
plastid 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG91822	Soybean	nucleus, plastid	94.67	94.3
KRH08551	Soybean	nucleus, plastid	74.75	72.74
Solyc06g065440.1.1	Tomato	cytosol	43.79	63.25
VIT_18s0072g00840.t01	Wine grape	nucleus	64.69	62.24
PGSC0003DMT400067092	Potato	nucleus	51.48	60.28
Solyc11g017140.1.1	Tomato	nucleus	56.02	58.56
PGSC0003DMT400023881	Potato	nucleus	57.4	56.73
GSMUA_Achr5P01170_001	Banana	nucleus	42.21	54.45
KXG33778	Sorghum	nucleus	51.08	49.9
Zm00001d042686_P001	Maize	nucleus	50.69	49.61
Zm00001d012260_P001	Maize	nucleus	50.69	49.52
GSMUA_Achr6P18840_001	Banana	nucleus	40.24	49.39
TraesCS3A01G381900.1	Wheat	nucleus	50.1	49.03
TraesCS3D01G375000.1	Wheat	nucleus	49.9	48.65
TraesCS3B01G414500.1	Wheat	nucleus	49.9	48.65
Os01t0871200-03	Rice	nucleus	49.51	48.08
KRH22822	Soybean	plastid	22.88	41.73
KRG97571	Soybean	nucleus, plastid	25.25	37.87
KRH43171	Soybean	nucleus, plastid	22.49	35.85
KRH25207	Soybean	nucleus	10.45	35.81
KRH59322	Soybean	nucleus	22.68	35.17
KRH31302	Soybean	nucleus, plastid	25.05	34.89
KRH25115	Soybean	nucleus	26.04	33.33
KRH26538	Soybean	nucleus, plastid	26.82	33.17
KRH30553	Soybean	nucleus, plastid	26.82	33.17
KRH18924	Soybean	nucleus	14.4	30.8
KRH16750	Soybean	nucleus	14.2	28.92
KRG92027	Soybean	nucleus	14.4	26.64
KRH34760	Soybean	nucleus	14.2	26.37
KRH10191	Soybean	nucleus, plastid	17.36	25.51
KRH23146	Soybean	nucleus, plastid	17.36	25.14
KRG95308	Soybean	nucleus, plastid	17.16	24.93
KRH24697	Soybean	nucleus, plastid	16.17	24.05
KRH66988	Soybean	nucleus	16.96	24.02
KRH29701	Soybean	nucleus	15.98	23.75
KRH43510	Soybean	nucleus, plastid	15.98	23.41
KRH13927	Soybean	nucleus, plastid	15.58	23.1
KRH27491	Soybean	nucleus, plastid	15.98	23.01
KRH20837	Soybean	nucleus, plastid	16.17	22.97
KRH71956	Soybean	nucleus, plastid	16.77	22.91
KRH22690	Soybean	nucleus	14.4	22.88
KRH70598	Soybean	nucleus	14.99	22.75
KRH26622	Soybean	nucleus	14.4	22.74
KRH30442	Soybean	nucleus	14.79	22.73
KRH75477	Soybean	nucleus	14.79	22.59
KRH33045	Soybean	nucleus, plastid	16.57	21.76
KRH25208	Soybean	nucleus, plastid	3.94	11.43

Protein Annotations

EMBL:ACUP02006645	EnsemblPlants:KRH34957	EnsemblPlantsGene:GLYMA_10G215200	EntrezGene:100170687	Gene3D:3.30.160.60	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR10593
PANTHER:PTHR10593:SF41	PFAM:PF12874	PFscan:PS50157	ProteinID:KRH34957	ProteinID:KRH34957.1	ScanProsite:PS00028
SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI00023CD304	UniProt:I1LD60	MapMan:15.5.15	:

Description

hypothetical protein

Coordinates

chr10:-:44733853..44736696

Molecular Weight (calculated)

56681.5 Da

IEP (calculated)

6.375

GRAVY (calculated)

-0.730

Length

507 amino acids

Sequence
(BLAST)

001: MDPKGSLCAK NCTRTSSLTS PGNGLQTNLS SDPPSFYGVR IESPFKEFIQ PSPPTQSVLP GESNADIDIP DQENCPLSNS SHTSKLQDWN PSAMLNNLSF
101: LEEKIHQLQD LVHVIVNKKC QPFGQPHELV TQEQQLITAD LTSIIVQLIS TAGSLLPSVR HTLTNTNPLV GQLDQLHGIN LPFGSEPSSG IRPQNNSGNK
201: LFDQSTQNDL PNKLEMEQNY NMEEHEPKDE EDADEGENLP PGSYEILQLE KEEILAPHTH FCTICGKGFK RDANLRMHMR GHGDKYKTPA ALAKPHKETG
301: SEPKLIKRYS CPYAGCKRNK DHKKFQPLKT ILCVKNHYKR THCDKSYTCS RCNTKKFSVM ADLKTHEKHC GKDKWLCSCG TTFSRKDKLF GHIALFQGHT
401: PAIPLDDTKG VAEPPDIQNR ESNNKVESIN FCFGSNPSTE NVVQNIMDMK GNIDDPMNYF SSLNFEGCNF GAFNEFSQPP FEDSEASFSF PMSGSYNYAP
501: KFDSDNL

Best Arabidopsis Sequence Match ( AT1G34370.2 )
(BLAST)

001: METEDDLCNT NWGSSSSKSR EPGSSDCGNS TFAGFTSQQK WEDASILDYE MGVEPGLQES IQANVDFLQG VRAQAWDPRT MLSNLSFMEQ KIHQLQDLVH
101: LLVGRGGQLQ GRQDELAAQQ QQLITTDLTS IIIQLISTAG SLLPSVKHNM STAPGPFTGQ PGSAVFPYVR EANNVASQSQ NNNNCGAREF DLPKPVLVDE
201: REGHVVEEHE MKDEDDVEEG ENLPPGSYEI LQLEKEEILA PHTHFCTICG KGFKRDANLR MHMRGHGDEY KTAAALAKPN KESVPGSEPM LIKRYSCPFL
301: GCKRNKEHKK FQPLKTILCV KNHYKRTHCD KSFTCSRCHT KKFSVIADLK THEKHCGKNK WLCSCGTTFS RKDKLFGHIA LFQGHTPAIP LEETKPSAST
401: STQRGSSEGG NNNQGMVGFN LGSASNANQE TTQPGMTDGR ICFEESFSPM NFDTCNFGGF HEFPRLMFDD SESSFQMLIA NACGFSPRNV GESVSDTSL

Arabidopsis Description

STOP1Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8N5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.