Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH18924 | Soybean | nucleus | 93.57 | 98.31 |
| KRH25207 | Soybean | nucleus | 39.36 | 66.22 |
| VIT_18s0001g05860.t01 | Wine grape | nucleus | 62.25 | 56.78 |
| Solyc04g074320.1.1 | Tomato | nucleus | 60.24 | 54.95 |
| CDY12025 | Canola | nucleus | 57.43 | 49.83 |
| Bra028067.1-P | Field mustard | nucleus | 57.03 | 49.48 |
| CDY03134 | Canola | nucleus | 56.63 | 49.13 |
| AT1G34790.1 | Thale cress | nucleus | 58.63 | 48.18 |
| KRH34760 | Soybean | nucleus | 51.41 | 46.89 |
| KRG92027 | Soybean | nucleus | 50.2 | 45.62 |
| KRH26622 | Soybean | nucleus | 53.82 | 41.74 |
| KRH22690 | Soybean | nucleus | 52.61 | 41.07 |
| KRH24697 | Soybean | nucleus, plastid | 56.22 | 41.06 |
| KRH30442 | Soybean | nucleus | 53.82 | 40.61 |
| KRH29701 | Soybean | nucleus | 55.42 | 40.47 |
| KRG95308 | Soybean | nucleus, plastid | 56.22 | 40.11 |
| KRH70598 | Soybean | nucleus | 53.01 | 39.52 |
| KRH27491 | Soybean | nucleus, plastid | 55.82 | 39.49 |
| KRH75477 | Soybean | nucleus | 52.61 | 39.46 |
| KRH10191 | Soybean | nucleus, plastid | 54.22 | 39.13 |
| KRH66988 | Soybean | nucleus | 56.22 | 39.11 |
| KRH20837 | Soybean | nucleus, plastid | 55.82 | 38.94 |
| KRH13927 | Soybean | nucleus, plastid | 53.01 | 38.6 |
| KRH43510 | Soybean | nucleus, plastid | 53.41 | 38.44 |
| KRH23146 | Soybean | nucleus, plastid | 53.82 | 38.29 |
| KRH71956 | Soybean | nucleus, plastid | 56.22 | 37.74 |
| KRH33045 | Soybean | nucleus, plastid | 56.22 | 36.27 |
| PGSC0003DMT400079144 | Potato | nucleus | 59.84 | 31.24 |
| KRH25208 | Soybean | nucleus, plastid | 15.66 | 22.29 |
| KRH22822 | Soybean | plastid | 23.29 | 20.86 |
| KRH59322 | Soybean | nucleus | 23.69 | 18.04 |
| KRH43171 | Soybean | nucleus, plastid | 22.89 | 17.92 |
| KRG97571 | Soybean | nucleus, plastid | 23.69 | 17.46 |
| KRH31302 | Soybean | nucleus, plastid | 25.3 | 17.31 |
| KRH25115 | Soybean | nucleus | 26.51 | 16.67 |
| KRH30553 | Soybean | nucleus, plastid | 26.51 | 16.1 |
| KRH26538 | Soybean | nucleus, plastid | 26.51 | 16.1 |
| KRH34957 | Soybean | nucleus, plastid | 28.92 | 14.2 |
| KRG91822 | Soybean | nucleus, plastid | 28.92 | 14.15 |
| KRH08551 | Soybean | nucleus, plastid | 28.51 | 13.63 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EntrezGene:547675 | EMBL:ACUP02008998 | EnsemblPlantsGene:GLYMA_14G174900 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | UniProt:I1MAV0 | InterPro:IPR013087 | EnsemblPlants:KRH16750 | ProteinID:KRH16750 |
| ProteinID:KRH16750.1 | PFAM:PF00096 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF69 |
| SMART:SM00355 | SUPFAM:SSF57667 | InterPro:TT1-like | UniParc:UPI000233AFB1 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr14:+:43192932..43195442
Molecular Weight (calculated)
28374.8 Da
IEP (calculated)
9.413
GRAVY (calculated)
-0.690
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MQIISKFHSF CLDMNQNQLQ PLPLLSSFLG SSPEESLLQN QNENPNACHA QVEDVTVALH IGLPDHSSGS NSTNNHGFVN ATTQVPNNYW IPTQEQILIG
101: FSHFSCPVCH KTFNRYNNLQ MHMWGHGSQY RRGPDSLKRT HPRPLLDLPC YCCARGCKNN IEHARAKPLK DFRTLQTHYK RKHGSKPFTC RKCGKPLAVK
201: GDWRTHEKNC GKRWLCICGS DFKHKRSLKD HIKAFGFGHT PFSSFSDGM
101: FSHFSCPVCH KTFNRYNNLQ MHMWGHGSQY RRGPDSLKRT HPRPLLDLPC YCCARGCKNN IEHARAKPLK DFRTLQTHYK RKHGSKPFTC RKCGKPLAVK
201: GDWRTHEKNC GKRWLCICGS DFKHKRSLKD HIKAFGFGHT PFSSFSDGM
001: MESPPLYEIS SSSSSEKPRH HFQSLDLFPN LNQNSCINNT LIEPLPLIDR INLNSNLDLN PNPLYAEEGE QEEEEEEEED REVDVDLHIG LPGFGKPSND
101: AKQLKKRNGK EIATYDAGKG IENELSGKAY WIPAPEQILI GFTHFSCHVC FKTFNRYNNL QMHMWGHGSQ YRKGPESLKG TQPRAMLGIP CYCCVEGCRN
201: HIDHPRSKPL KDFRTLQTHY KRKHGHKPFS CRLCGKLLAV KGDWRTHEKN CGKRWVCVCG SDFKHKRSLK DHVKAFGSGH GPYPTGLFEE QASNSSVSET
301: LFF
101: AKQLKKRNGK EIATYDAGKG IENELSGKAY WIPAPEQILI GFTHFSCHVC FKTFNRYNNL QMHMWGHGSQ YRKGPESLKG TQPRAMLGIP CYCCVEGCRN
201: HIDHPRSKPL KDFRTLQTHY KRKHGHKPFS CRLCGKLLAV KGDWRTHEKN CGKRWVCVCG SDFKHKRSLK DHVKAFGSGH GPYPTGLFEE QASNSSVSET
301: LFF
Arabidopsis Description
TT1Protein TRANSPARENT TESTA 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWG3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.