Subcellular Localization
min:
: max
Winner_takes_all: nucleus, plastid
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH23146 | Soybean | nucleus, plastid | 91.88 | 90.57 |
| KRH25207 | Soybean | nucleus | 30.43 | 70.95 |
| Solyc11g062060.1.1 | Tomato | nucleus | 53.04 | 70.11 |
| KRH29701 | Soybean | nucleus | 64.06 | 64.81 |
| KRH24697 | Soybean | nucleus, plastid | 64.06 | 64.81 |
| VIT_06s0004g01870.t01 | Wine grape | nucleus | 61.45 | 63.47 |
| GSMUA_Achr9P12600_001 | Banana | nucleus | 55.94 | 62.06 |
| GSMUA_Achr3P03850_001 | Banana | plastid | 57.68 | 61.61 |
| GSMUA_AchrUn_... | Banana | plastid | 57.1 | 60.24 |
| PGSC0003DMT400035408 | Potato | nucleus | 60.29 | 59.94 |
| GSMUA_Achr8P25650_001 | Banana | nucleus, plastid | 51.88 | 59.67 |
| GSMUA_Achr4P01560_001 | Banana | nucleus | 55.07 | 59.01 |
| GSMUA_Achr6P03470_001 | Banana | nucleus | 54.2 | 58.62 |
| KRG95308 | Soybean | nucleus, plastid | 59.13 | 58.45 |
| KRH66988 | Soybean | nucleus | 59.13 | 56.98 |
| KRH18924 | Soybean | nucleus | 39.13 | 56.96 |
| GSMUA_Achr3P11050_001 | Banana | cytosol, nucleus, plastid | 56.23 | 56.89 |
| GSMUA_AchrUn_... | Banana | nucleus | 55.65 | 55.81 |
| Bra030450.1-P | Field mustard | nucleus | 54.2 | 55.0 |
| KRH71956 | Soybean | nucleus, plastid | 59.13 | 54.99 |
| CDY29624 | Canola | nucleus | 53.91 | 54.71 |
| AT1G51220.1 | Thale cress | nucleus | 53.33 | 54.6 |
| CDY35565 | Canola | nucleus | 53.62 | 54.57 |
| CDY25224 | Canola | nucleus | 53.33 | 54.44 |
| KRH27491 | Soybean | nucleus, plastid | 55.36 | 54.26 |
| KRH16750 | Soybean | nucleus | 39.13 | 54.22 |
| CDY22834 | Canola | nucleus, plastid | 53.04 | 54.14 |
| Bra018902.1-P | Field mustard | plastid | 52.46 | 53.71 |
| CDY06390 | Canola | nucleus | 51.88 | 53.59 |
| KRH34760 | Soybean | nucleus | 42.32 | 53.48 |
| KRG92027 | Soybean | nucleus | 42.32 | 53.28 |
| KRH20837 | Soybean | nucleus, plastid | 55.07 | 53.22 |
| KRH43510 | Soybean | nucleus, plastid | 53.33 | 53.18 |
| KRH33045 | Soybean | nucleus, plastid | 58.55 | 52.33 |
| KRH13927 | Soybean | nucleus, plastid | 51.59 | 52.05 |
| CDY57920 | Canola | nucleus | 52.17 | 50.14 |
| Bra023918.1-P | Field mustard | nucleus | 52.17 | 50.14 |
| TraesCS7A01G404400.1 | Wheat | nucleus | 53.33 | 50.0 |
| TraesCS7B01G304000.1 | Wheat | nucleus | 53.33 | 49.73 |
| CDY27556 | Canola | nucleus | 51.59 | 49.72 |
| Bra031239.1-P | Field mustard | nucleus | 51.59 | 49.58 |
| TraesCS7D01G397800.1 | Wheat | nucleus | 53.04 | 49.46 |
| KRH22690 | Soybean | nucleus | 44.64 | 48.28 |
| Zm00001d046774_P001 | Maize | nucleus | 55.36 | 47.99 |
| Zm00001d036812_P001 | Maize | nucleus | 53.91 | 47.81 |
| KRH70598 | Soybean | nucleus | 46.09 | 47.6 |
| KRH26622 | Soybean | nucleus | 44.06 | 47.35 |
| KRH75477 | Soybean | nucleus | 45.22 | 46.99 |
| KRH30442 | Soybean | nucleus | 44.93 | 46.97 |
| EER88644 | Sorghum | nucleus, plastid | 54.78 | 46.78 |
| AT3G20880.1 | Thale cress | nucleus | 51.59 | 43.2 |
| Os06t0612300-01 | Rice | endoplasmic reticulum, vacuole | 54.49 | 42.25 |
| KRH25208 | Soybean | nucleus, plastid | 15.65 | 30.86 |
| KRH22822 | Soybean | plastid | 17.97 | 22.3 |
| KRH59322 | Soybean | nucleus | 18.84 | 19.88 |
| KRG97571 | Soybean | nucleus, plastid | 19.42 | 19.82 |
| KRH43171 | Soybean | nucleus, plastid | 17.68 | 19.18 |
| KRH25115 | Soybean | nucleus | 21.45 | 18.69 |
| KRH30553 | Soybean | nucleus, plastid | 22.03 | 18.54 |
| KRH31302 | Soybean | nucleus, plastid | 19.42 | 18.41 |
| KRH26538 | Soybean | nucleus, plastid | 20.87 | 17.56 |
| KRH34957 | Soybean | nucleus, plastid | 25.51 | 17.36 |
| KRG91822 | Soybean | nucleus, plastid | 24.93 | 16.9 |
| KRH08551 | Soybean | nucleus, plastid | 25.22 | 16.7 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EMBL:ACUP02009121 | EnsemblPlantsGene:GLYMA_15G033600 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | UniProt:I1MDA5 | InterPro:IPR013087 | EnsemblPlants:KRH10191 | ProteinID:KRH10191 | ProteinID:KRH10191.1 |
| ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF98 | SUPFAM:SSF57667 | UniParc:UPI000233B764 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr15:-:2675618..2678073
Molecular Weight (calculated)
38957.6 Da
IEP (calculated)
7.876
GRAVY (calculated)
-0.762
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MTHPYCSNDF NAWFDLNSPC LFSTSSSPCS NNPPFYFPTS NTNYLHNCTN NDISFTQHIQ SSPSSFPLPK EELPLLNLSP ARGEDLESSF SAMKVNKEKE
101: KELSMSANNN SLDDETAVTV ALHLGLPSTT TTTTSSADLT SNVYSDKEDK KDTVASEYSP TRINKGQYWI PTPAQILIGP TQFSCPLCFK TFNRYNNMQM
201: HMWGHGSQYR KGPESLRGTQ PTAMLRLPCY CCAPGCKNNI DHPRAKPLKD FRTLQTHYKR KHGIKPFMCR KCCKAFAVRG DWRTHEKNCG KLWYCSCGSD
301: FKHKRSLKDH IKAFGNGHKA YGIDSCLDQD DEAGSEIEQE NNESF
101: KELSMSANNN SLDDETAVTV ALHLGLPSTT TTTTSSADLT SNVYSDKEDK KDTVASEYSP TRINKGQYWI PTPAQILIGP TQFSCPLCFK TFNRYNNMQM
201: HMWGHGSQYR KGPESLRGTQ PTAMLRLPCY CCAPGCKNNI DHPRAKPLKD FRTLQTHYKR KHGIKPFMCR KCCKAFAVRG DWRTHEKNCG KLWYCSCGSD
301: FKHKRSLKDH IKAFGNGHKA YGIDSCLDQD DEAGSEIEQE NNESF
001: MSNPACSNLF NNGCDHNSFN YSTSLSYIYN SHGSYYYSNT TNPNYINHTH TTSTSPNSPP LREALPLLSL SPIRHQEQQD QHYFMDTHQI SSSNFLDDPL
101: VTVDLHLGLP NYGVGESIRS NIAPDATTDE QDQDHDRGVE VTVESHLDDD DDHHGDLHRG HHYWIPTPSQ ILIGPTQFTC PLCFKTFNRY NNMQMHMWGH
201: GSQYRKGPES LRGTQPTGML RLPCFCCAPG CKNNIDHPRA KPLKDFRTLQ THYKRKHGSK PFACRMCGKA FAVKGDWRTH EKNCGKLWYC SCGSDFKHKR
301: SLKDHVKAFG NGHVPCGIDS FGGDHEDYYD AASDIEQ
101: VTVDLHLGLP NYGVGESIRS NIAPDATTDE QDQDHDRGVE VTVESHLDDD DDHHGDLHRG HHYWIPTPSQ ILIGPTQFTC PLCFKTFNRY NNMQMHMWGH
201: GSQYRKGPES LRGTQPTGML RLPCFCCAPG CKNNIDHPRA KPLKDFRTLQ THYKRKHGSK PFACRMCGKA FAVKGDWRTH EKNCGKLWYC SCGSDFKHKR
301: SLKDHVKAFG NGHVPCGIDS FGGDHEDYYD AASDIEQ
Arabidopsis Description
WIP5Zinc finger protein WIP5 [Source:UniProtKB/Swiss-Prot;Acc:Q8W031]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.