CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 5
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25115	Soybean	nucleus	82.68	85.61
KRH22822	Soybean	plastid	43.66	64.39
KRH26538	Soybean	nucleus, plastid	55.37	55.37
GSMUA_Achr1P15330_001	Banana	cytosol	36.34	53.02
GSMUA_Achr11P...	Banana	nucleus	37.8	45.59
KRH25207	Soybean	nucleus	12.68	35.14
KRG97571	Soybean	nucleus, plastid	28.54	34.62
KRH43171	Soybean	nucleus, plastid	26.1	33.65
KRH59322	Soybean	nucleus	26.83	33.64
KRH31302	Soybean	nucleus, plastid	27.56	31.04
KRH34957	Soybean	nucleus, plastid	33.17	26.82
KRG91822	Soybean	nucleus, plastid	33.17	26.72
KRH18924	Soybean	nucleus	15.37	26.58
KRH16750	Soybean	nucleus	16.1	26.51
KRH08551	Soybean	nucleus, plastid	32.93	25.91
KRG92027	Soybean	nucleus	16.83	25.18
KRH34760	Soybean	nucleus	16.34	24.54
KRH22690	Soybean	nucleus	17.32	22.26
KRH30442	Soybean	nucleus	17.8	22.12
KRH26622	Soybean	nucleus	17.32	22.12
KRH10191	Soybean	nucleus, plastid	18.54	22.03
KRG95308	Soybean	nucleus, plastid	18.54	21.78
KRH29701	Soybean	nucleus	18.05	21.7
KRH24697	Soybean	nucleus, plastid	18.05	21.7
KRH66988	Soybean	nucleus	18.78	21.51
KRH23146	Soybean	nucleus, plastid	18.29	21.43
KRH75477	Soybean	nucleus	17.32	21.39
KRH70598	Soybean	nucleus	16.83	20.66
KRH20837	Soybean	nucleus, plastid	17.8	20.45
KRH71956	Soybean	nucleus, plastid	18.29	20.22
KRH33045	Soybean	nucleus, plastid	19.02	20.21
KRH13927	Soybean	nucleus, plastid	16.83	20.18
KRH27491	Soybean	nucleus, plastid	17.32	20.17
KRH43510	Soybean	nucleus, plastid	16.59	19.65
KRH25208	Soybean	nucleus, plastid	5.37	12.57

Protein Annotations

EMBL:ACUP02007036	EnsemblPlants:KRH30553	EnsemblPlantsGene:GLYMA_11G192400	EntrezGene:100802399	Gene3D:3.30.160.60	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR10593
PANTHER:PTHR10593:SF41	PFscan:PS50157	ProteinID:KRH30553	ProteinID:KRH30553.1	ScanProsite:PS00028	SEG:seg
SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI000233CE77	UniProt:I1LKY9	MapMan:15.5.15	:

Description

hypothetical protein

Coordinates

chr11:-:26552983..26554975

Molecular Weight (calculated)

45780.1 Da

IEP (calculated)

8.535

GRAVY (calculated)

-0.584

Length

410 amino acids

Sequence
(BLAST)

001: MMPKATISTT PTNDFQELHM FPAAVNNEYL VSPSLEASSS SSPSHSSSNS LLFYLSLLKD KLGQLHNLVG VLVSPQQNLP ESTPTAISTI NNTIQEIIVA
101: ATSMRFTCQQ MISSSPSGTN TINELHQQQI DHGRLLPPSH HESNFINNNR GVPSNINIVS HINRGQSFLS NSIEGEASLD WFAESYNNSN SGNNYFNPKD
201: DEAANIINNI MGETSDDIIE LDAADLLAKY SYFCQVCGKG FKRDANLRMH MRAHGEEYKT SAALRNPMKK NNKKESNLLF LGAEGSVTKR YSCPQQGCRW
301: NQRHAKFQPL KSMICAKNHY KRSHCPKMYM CNRCNQKQFS VLSDLRTHEK HCGDYPKWQC SCGTTFSRKD KLMGHITLFA GHTPVPNING MSSYMGKSEV
401: QQNNIAGGLR

Best Arabidopsis Sequence Match ( AT1G34370.1 )
(BLAST)

001: METEDDLCNT NWGSSSSKSR EPGSSDCGNS TFAGFTSQQK WEDASILDYE MGVEPGLQES IQANVDFLQG VRAQAWDPRT MLSNLSFMEQ KIHQLQDLVH
101: LLVGRGGQLQ GRQDELAAQQ QQLITTDLTS IIIQLISTAG SLLPSVKHNM STAPGPFTGQ PGSAVFPYVR EANNVASQSQ NNNNCGAREF DLPKPVLVDE
201: REGHVVEEHE MKDEDDVEEG ENLPPGSYEI LQLEKEEILA PHTHFCTICG KGFKRDANLR MHMRGHGDEY KTAAALAKPN KESVPGSEPM LIKRYSCPFL
301: GCKRNKEHKK FQPLKTILCV KNHYKRTHCD KSFTCSRCHT KKFSVIADLK THEKHCGKNK WLCSCGTTFS RKDKLFGHIA LFQGHTPAIP LEETKPSAST
401: STQRGSSEGG NNNQGMVGFN LGSASNANQE TTQPGMTDGR ICFEESFSPM NFDTCNFGGF HEFPRLMFDD SESSFQMLIA NACGFSPRNV GESVSDTSL

Arabidopsis Description

STOP1Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8N5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.